RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SLC35D2Q76EJ3 337 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 LUZP2Q86TE4 346 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 SVOPLQ8N434 492 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 RELL2Q8NC24 303 aaPredicted RBP18.86■□□□□ 0.61
CASC4-204ENST00000557945 TMEM45BQ96B21 275 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 APH1AQ96BI3 265 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 TXNDC15Q96J42 360 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 UCK2Q9BZX2 261 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 OPN3Q9H1Y3 402 aaPredicted RBP18.86■□□□□ 0.61
CASC4-204ENST00000557945 MED29Q9NX70 200 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 IL20RAQ9UHF4 553 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 OAZ3Q9UMX2 235 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 NCOA6Q14686 2063 aaPredicted RBP18.85■□□□□ 0.61
CASC4-204ENST00000557945 MCIDASD6RGH6 385 aa18.85■□□□□ 0.61
CASC4-204ENST00000557945 AKAP8O43823 692 aaKnown RBP18.85■□□□□ 0.61
CASC4-204ENST00000557945 ZNF26P17031 533 aaPredicted RBP18.85■□□□□ 0.61
CASC4-204ENST00000557945 CDSNQ15517 529 aa18.85■□□□□ 0.61
CASC4-204ENST00000557945 SLC25A35Q3KQZ1 300 aa18.85■□□□□ 0.61
CASC4-204ENST00000557945 ANKRD34AQ69YU3 496 aa18.85■□□□□ 0.61
CASC4-204ENST00000557945 SMARCD3Q6STE5 483 aa18.85■□□□□ 0.61
CASC4-204ENST00000557945 ZNF610Q8N9Z0 462 aa18.85■□□□□ 0.61
CASC4-204ENST00000557945 SSC4DQ8WTU2 575 aa18.85■□□□□ 0.61
CASC4-204ENST00000557945 EMC6Q9BV81 110 aa18.85■□□□□ 0.61
CASC4-204ENST00000557945 PLSCR4Q9NRQ2 329 aa18.85■□□□□ 0.61
CASC4-204ENST00000557945 ZNF726A6NNF4 738 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 BCL10O95999 233 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 CGAP01215 116 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 IGHV3-9P01782 118 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 RNF224P0DH78 156 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 CD8BP10966 210 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 OR3A2P47893 321 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 SELENOPP49908 381 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 BIDP55957 195 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 TOP3AQ13472 1001 aaPredicted RBP18.84■□□□□ 0.61
CASC4-204ENST00000557945 MELKQ14680 651 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 ZNF620Q6ZNG0 422 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 LRRC75AQ8NAA5 344 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 POLDIP3Q9BY77 421 aaKnown RBP18.84■□□□□ 0.61
CASC4-204ENST00000557945 OR52D1Q9H346 318 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 KCNJ16Q9NPI9 418 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 RCE1Q9Y256 329 aa18.84■□□□□ 0.61
CASC4-204ENST00000557945 UBR5O95071 2799 aaPredicted RBP18.84■□□□□ 0.61
CASC4-204ENST00000557945 SLC35F4A4IF30 521 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 NKX2-6A6NCS4 301 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 PDLIM1O00151 329 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 MSTNO14793 375 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 CLDN14O95500 239 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 ANPEPP15144 967 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 EDNRAP25101 427 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 DAP3P51398 398 aaKnown RBP18.83■□□□□ 0.61
CASC4-204ENST00000557945 FXYD6P3P58550 94 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 ERVK-25P63136 954 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 COX10Q12887 443 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 ACKR1Q16570 336 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 RFX4Q33E94 735 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 CARD17Q5XLA6 110 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 TFAP2EQ6VUC0 442 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 NHLRC1Q6VVB1 395 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 THSD4Q6ZMP0 1018 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 RASSF6Q6ZTQ3 369 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 KIF18BQ86Y91 864 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 UBE2J2Q8N2K1 259 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 SAMD8Q96LT4 415 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 KATNB1Q9BVA0 655 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 ENKD1Q9H0I2 346 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 EGLN3Q9H6Z9 239 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 SMURF2Q9HAU4 748 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 PRSS50Q9UI38 385 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 CDH10Q9Y6N8 788 aa18.83■□□□□ 0.61
CASC4-204ENST00000557945 CLEC18AA5D8T8 446 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 WIPF3A6NGB9 483 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 SLC43A1O75387 559 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 SOX14O95416 240 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 CD14P08571 375 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 SLC6A6P31641 620 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 RPL13AP3Q6NVV1 102 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 FAHD1Q6P587 224 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 KLHL17Q6TDP4 642 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 CLEC18BQ6UXF7 455 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 CD300LDQ6UXZ3 194 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 CLEC18CQ8NCF0 446 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 OR2M2Q96R28 347 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 CIB1Q99828 191 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 TXNIPQ9H3M7 391 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 TBC1D23Q9NUY8 699 aa18.82■□□□□ 0.6
CASC4-204ENST00000557945 A8MXE2 369 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 KRT33AO76009 404 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 ASCL1P50553 236 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 DAPP51397 102 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 CAMK2DQ13557 499 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 CLEC12AQ5QGZ9 265 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 DPY19L2P2Q6ZN68 376 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 OR52L1Q8NGH7 329 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 OR6X1Q8NH79 312 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 ADAD1Q96M93 576 aaKnown RBP18.81■□□□□ 0.6
CASC4-204ENST00000557945 IFT27Q9BW83 186 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 GABARAPL1Q9H0R8 117 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 SLCO5A1Q9H2Y9 848 aa18.81■□□□□ 0.6
CASC4-204ENST00000557945 PAPOLBQ9NRJ5 636 aaKnown RBP18.81■□□□□ 0.6
CASC4-204ENST00000557945 GRHPRQ9UBQ7 328 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms