RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 FGF22Q9HCT0 170 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 TMEM138Q9NPI0 162 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 FBXL2Q9UKC9 423 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 MRPS2Q9Y399 296 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 EML5Q05BV3 1969 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 TRBV5-5A0A0J9YX44 114 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 FAM171A2A8MVW0 826 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 CYR61O00622 381 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 EML2O95834 649 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 CBX7O95931 251 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 PRPS1P60891 318 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 GXYLT1Q4G148 440 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 LIPNQ5VXI9 398 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 FCRL6Q6DN72 434 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 TSSK4Q6SA08 328 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 PRSS41Q7RTY9 318 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 MUC20Q8N307 709 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 OR6K3Q8NGY3 331 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 FLVCR1-AS1Q8TAF5 88 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 HOXB13Q92826 284 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 RERGQ96A58 199 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 Q96M85 177 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 ADAD1Q96M93 576 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 FKRPQ9H9S5 495 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 CXXC1Q9P0U4 656 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 PILRAQ9UKJ1 303 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 A0A087WUJ7 227 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 A0A087WV48 116 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 TBC1D3IA0A087WXS9 549 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 TMEM72A0PK05 275 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 TEX46H3BTG2 121 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 NUPL2O15504 423 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 UPK3AO75631 287 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF432O94892 652 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 KAT7O95251 611 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 GUSBP08236 651 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 ICAM2P13598 275 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 RPA2P15927 270 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 TCEA2Q15560 299 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 C1orf53Q5VUE5 145 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 MAMSTRQ6ZN01 415 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 JAZF1Q86VZ6 243 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF511Q8NB15 262 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 OR5T3Q8NGG3 340 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF417Q8TAU3 575 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 SPPL3Q8TCT6 385 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 CCDC74AQ96AQ1 378 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 SCARF2Q96GP6 870 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 CAPNS2Q96L46 248 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 MFFQ9GZY8 342 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 EXOSC3Q9NQT5 275 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 STEAP1Q9UHE8 339 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 MRM2Q9UI43 246 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 GPR160Q9UJ42 338 aa10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 CDV3Q9UKY7 258 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-211ENST00000557658 PRSS38A1L453 326 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 HPP00738 406 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 TIMP1P01033 207 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 IGKV1D-16P01601 117 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 MAS1P04201 325 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 AKAIN1P0CW23 69 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 GTF2F2P13984 249 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 UBE2MP61081 183 aaKnown RBP10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 PSG6Q00889 435 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 DCAF12L2Q5VW00 463 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 ANKRD16Q6P6B7 361 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 SHISA5Q8N114 240 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 ASB16Q96NS5 453 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 ZFYVE21Q9BQ24 234 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 SLC25A32Q9H2D1 315 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 APMAPQ9HDC9 416 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 IFT46Q9NQC8 304 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 FRRS1LQ9P0K9 344 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 MOKQ9UQ07 419 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 HRH3Q9Y5N1 445 aa10.77□□□□□ -0.68
VIPAS39-211ENST00000557658 TRBV23OR9-2A0A075B6M9 112 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 GGT3PA6NGU5 568 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 EFCAB7A8K855 629 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 H0YGG7 62 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 OR10H2O60403 315 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 FKTNO75072 461 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 SPDEFO95238 335 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 SLC25A1P53007 311 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 ARF3P61204 181 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 RPS4XP62701 263 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 PLA2G7Q13093 441 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 FAM53BQ14153 422 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 ZMYND11Q15326 602 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 ZNF141Q15928 474 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 C4orf46Q504U0 113 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 C2orf27AQ580R0 203 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 ZNF595Q8IYB9 648 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 CA13Q8N1Q1 262 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 SDR16C5Q8N3Y7 309 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 OR4N2Q8NGD1 307 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 OR14C36Q8NHC7 312 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 DMRTA2Q96SC8 542 aa10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 GPX7Q96SL4 187 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-211ENST00000557658 LMF2Q9BU23 707 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms