RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SEC14L2O76054 403 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 MFN2O95140 757 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 BGLAPP02818 100 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 CELA3BP08861 270 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 OR4A8P0C604 315 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 CBR1P16152 277 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 ZNF16P17020 682 aaPredicted RBP12.3□□□□□ -0.44
SNX6-210ENST00000557341 ARR3P36575 388 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 CAPZA2P47755 286 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 PPOXP50336 477 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 PCBP3P57721 371 aaKnown RBP12.3□□□□□ -0.44
SNX6-210ENST00000557341 PUDPQ08623 228 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 RBBP4Q09028 425 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 NPRL3Q12980 569 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 RUNDC3AQ59EK9 446 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 MYPOPQ86VE0 399 aaPredicted RBP12.3□□□□□ -0.44
SNX6-210ENST00000557341 CCDC36Q8IYA8 594 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 SMYD1Q8NB12 490 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 ZNF837Q96EG3 531 aaPredicted RBP12.3□□□□□ -0.44
SNX6-210ENST00000557341 VRK1Q99986 396 aaPredicted RBP12.3□□□□□ -0.44
SNX6-210ENST00000557341 PLK3Q9H4B4 646 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 ZNF442Q9H7R0 627 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 B3GAT2Q9NPZ5 323 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 MRPL39Q9NYK5 338 aaKnown RBP12.3□□□□□ -0.44
SNX6-210ENST00000557341 TRIM33Q9UPN9 1127 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 USP22Q9UPT9 525 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 NDUFAF1Q9Y375 327 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 NOX1Q9Y5S8 564 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 FBN3Q75N90 2809 aa12.3□□□□□ -0.44
SNX6-210ENST00000557341 ZNF503-AS2A6NEH8 195 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 VWC2LB2RUY7 222 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 MS4A18H0YCH9 400 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 M0R3H8 397 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 CHP2O43745 196 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 TPST2O60704 377 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 FMO6PO60774 539 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 HPRP00739 348 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 IGHV4-31P0DP07 118 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 HLA-DOBP13765 273 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 CDH12P55289 794 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 MTPNP58546 118 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 PMS2P3Q13401 168 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 GGTLC2Q14390 218 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 MS4A18Q3C1V0 323 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 CARD17Q5XLA6 110 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 ZNF613Q6PF04 617 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 SNX32Q86XE0 403 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 PTOV1Q86YD1 416 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 C20orf196Q8IYI0 205 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 DPP10Q8N608 796 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 C10orf53Q8N6V4 93 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 ANKS4BQ8N8V4 417 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 SPATA3Q8NHX4 192 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 LRR1Q96L50 414 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 MAGEB18Q96M61 343 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 ANKRD27Q96NW4 1050 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 MOGAT1Q96PD6 335 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 KCNK17Q96T54 332 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 MCHR1Q99705 422 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 WFDC6Q9BQY6 131 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 EMC6Q9BV81 110 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 TMEM160Q9NX00 188 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 MED29Q9NX70 200 aa12.29□□□□□ -0.44
SNX6-210ENST00000557341 IGHV2OR16-5A0A0B4J2B6 119 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 LOC390937A0A1W2PQ73 354 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 SLC35F4A4IF30 521 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 VSTM5A8MXK1 200 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 hCG_2039718K7EN88 272 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 MT-ATP6P00846 226 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 OPN1SWP03999 348 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 C8BP07358 591 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 ERCC1P07992 297 aaPredicted RBP12.28□□□□□ -0.44
SNX6-210ENST00000557341 FAM157CP0CG43 387 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 NPR2P20594 1047 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 AHCYP23526 432 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 NR4A2P43354 598 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 GZMKP49863 264 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 LSM11P83369 360 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNX6-210ENST00000557341 SNTB2Q13425 540 aaKnown RBP12.28□□□□□ -0.44
SNX6-210ENST00000557341 NFYCQ13952 458 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 CARTPTQ16568 116 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 GSG1Q2KHT4 349 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 PHYHD1Q5SRE7 291 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 CYB5R2Q6BCY4 276 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 MDP1Q86V88 176 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 SLC30A8Q8IWU4 369 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 IL17RDQ8NFM7 739 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 CKAP2Q8WWK9 683 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 THOC1Q96FV9 657 aaKnown RBP12.28□□□□□ -0.44
SNX6-210ENST00000557341 CGREF1Q99674 301 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 ARHGDIGQ99819 225 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 SIKE1Q9BRV8 207 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 ULBP2Q9BZM5 246 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 RAB1BQ9H0U4 201 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 ZNF385DQ9H6B1 395 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 LPAR3Q9UBY5 353 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 STAB1Q9NY15 2570 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 SVEP1Q4LDE5 3571 aa12.28□□□□□ -0.44
SNX6-210ENST00000557341 CPSF4LA6NMK7 179 aaKnown RBP12.27□□□□□ -0.45
SNX6-210ENST00000557341 ZNF726A6NNF4 738 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms