RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PRICKLE2Q7Z3G6 844 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 LRRTM1Q86UE6 522 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 NSG2Q9Y328 171 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 TRBV23OR9-2A0A075B6M9 112 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 ABCD3P28288 659 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 RABIFP47224 123 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 INCA1Q0VD86 236 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 SLC14A2Q15849 920 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 RAB6CQ53S08 254 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 OR4F5Q8NH21 305 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 OR4F4Q96R69 305 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 CUL9Q8IWT3 2517 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 ARNTP27540 789 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 GPR12P47775 334 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 GPR18Q14330 331 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 OR13F1Q8NGS4 319 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 SH3RF2Q8TEC5 729 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM239Q8WW34 195 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 TIMD4Q96H15 378 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 PECRQ9BY49 303 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 UBQLN3Q9H347 655 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 DECR2Q9NUI1 292 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 SLIT3O75094 1523 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 HELTA6NFD8 242 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 CLDN7O95471 211 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 NTF3P20783 257 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 ERVPABLB-1P60509 514 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 TECRLQ5HYJ1 363 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 CPOQ8IVL8 374 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 OR51A4Q8NGJ6 313 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 SLC46A1Q96NT5 459 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 RAF1P04049 648 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 C8orf89P0DMQ9 161 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 PM20D1Q6GTS8 502 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 MEPCEQ7L2J0 689 aaKnown RBP8.24□□□□□ -1.09
SYNE3-205ENST00000557275 FANCMQ8IYD8 2048 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 IMP4Q96G21 291 aaKnown RBP8.24□□□□□ -1.09
SYNE3-205ENST00000557275 FKRPQ9H9S5 495 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 MRPS16Q9Y3D3 137 aaKnown RBP8.24□□□□□ -1.09
SYNE3-205ENST00000557275 C1orf167Q5SNV9 1468 aa8.24□□□□□ -1.09
SYNE3-205ENST00000557275 A0A0B4J2A0 478 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM269A0A1B0GVZ9 245 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF727A8MUV8 499 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 CR2P20023 1033 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 OMGP23515 440 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 DDOSTP39656 456 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 SDHAF4Q5VUM1 108 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 HUS1BQ8NHY5 278 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 TVP23CQ96ET8 276 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 POLLQ9UGP5 575 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 SHPKQ9UHJ6 478 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM233B4DJY2 109 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 SNU13P55769 128 aaKnown RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ZP2Q05996 745 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 HTR4Q13639 388 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 DEFB134Q4QY38 66 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 SMIM7Q9BQ49 75 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ZPBPQ9BS86 351 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ALX3O95076 343 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 APOBEC3HQ6NTF7 200 aaKnown RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 RNF175Q8N4F7 328 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ARL14EPQ8N8R7 260 aaPredicted RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 EPHX3Q9H6B9 360 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ERVMER34-1Q9H9K5 563 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 MRPL42Q9Y6G3 142 aaKnown RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 MEIS3P2A8K0S8 358 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 GALR3O60755 368 aaPredicted RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 PRAMEF11O60813 436 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 SCG5P05408 212 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 KCNQ1P51787 676 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 OR5I1Q13606 314 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 SOWAHCQ53LP3 525 aaPredicted RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 NCBP2-AS2Q69YL0 99 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ILDR1Q86SU0 546 aaPredicted RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 PIM3Q86V86 326 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 CREBZFQ9NS37 354 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 FTSJ1Q9UET6 329 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 AK3Q9UIJ7 227 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 MEIS3P1A6NDR6 274 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 TISP43B9A030 160 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 EIF1P41567 113 aaKnown RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 RAB33AQ14088 237 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF628Q5EBL2 1059 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 OR13C4Q8NGS5 318 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 SDR39U1Q9NRG7 319 aaPredicted RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 IFT172Q9UG01 1749 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 TYROBPO43914 113 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 GRPRP30550 384 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 FOLR3P41439 243 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 RRADP55042 308 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 EMC10Q5UCC4 262 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 C7orf43Q8WVR3 580 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 OR2J1Q9GZK6 312 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM59LQ9UK28 342 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 NDRG2Q9UN36 371 aaKnown RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 LAMA4Q16363 1823 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 KIAA2026Q5HYC2 2103 aa8.23□□□□□ -1.09
SYNE3-205ENST00000557275 RIF1Q5UIP0 2472 aaKnown RBP8.23□□□□□ -1.09
SYNE3-205ENST00000557275 EIF1BO60739 113 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms