RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 HTR1FP30939 366 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SLC6A6P31641 620 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 UGT2B10P36537 528 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SLC1A3P43003 542 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 GPR4P46093 362 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 CAPZA2P47755 286 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 MTNR1AP48039 350 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 MASP1P48740 699 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SLC9A3P48764 834 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 CLK1P49759 484 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 NR0B1P51843 470 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 NUDT6P53370 316 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SCAND1P57086 179 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 E2F1Q01094 437 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SRSF2Q01130 221 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 MC2RQ01718 297 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ZNF91Q05481 1191 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ZFP36L1Q07352 338 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 DCTN2Q13561 401 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 SPHARQ15513 63 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ISXQ2M1V0 245 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 PGGHGQ32M88 737 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ZNF829Q3KNS6 432 aaPredicted RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 CLEC12AQ5QGZ9 265 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ARMC4Q5T2S8 1044 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 PRAMEF17Q5VTA0 474 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 AADACL4Q5VUY2 407 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 NXNL2Q5VZ03 156 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 DPY19L2P2Q6ZN68 376 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ZNF620Q6ZNG0 422 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SLC16A12Q6ZSM3 486 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 MEPCEQ7L2J0 689 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 HIST3H2AQ7L7L0 130 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SLC46A3Q7Z3Q1 461 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ANKRD37Q7Z713 158 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 MISPQ8IVT2 679 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 GID4Q8IVV7 300 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 PRSS58Q8IYP2 241 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 IQCF1Q8N6M8 205 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 NANOGP1Q8N7R0 232 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 TMEM105Q8N8V8 129 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 POGLUT1Q8NBL1 392 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 OR8K3Q8NH51 312 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 OR51A7Q8NH64 312 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 GRHL3Q8TE85 626 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 FGF11Q92914 225 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 HIST1H2ACQ93077 130 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 TSLPQ969D9 159 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 EFHD2Q96C19 240 aaPredicted RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 TMCO6Q96DC7 493 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ZHX1-C8orf76Q96EF9 292 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SGTBQ96EQ0 304 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 RNFT2Q96EX2 444 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 LRFN5Q96NI6 719 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 TNFRSF13CQ96RJ3 184 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 MGLLQ99685 303 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 DCUN1D5Q9BTE7 237 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 TMEM43Q9BTV4 400 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 ZNF426Q9BUY5 554 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 IFT27Q9BW83 186 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 TBL1XR1Q9BZK7 514 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SEMA4CQ9C0C4 833 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 WWTR1Q9GZV5 400 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 NAA50Q9GZZ1 169 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 NXF5Q9H1B4 397 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 FN3KQ9H479 309 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SYNDIG1Q9H7V2 258 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 WDR54Q9H977 334 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 LIN28AQ9H9Z2 209 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 ISYNA1Q9NPH2 558 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SDHAF3Q9NRP4 125 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SLC22A11Q9NSA0 550 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 DNAJC27Q9NZQ0 273 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 FLRT3Q9NZU0 649 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 SEC14L4Q9UDX3 406 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 EXOGQ9Y2C4 368 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 DTX4Q9Y2E6 619 aa4.04□□□□□ -1.76
SRP54-212ENST00000556992 EXOSC1Q9Y3B2 195 aaKnown RBP4.04□□□□□ -1.76
SRP54-212ENST00000556992 WDFY3Q8IZQ1 3526 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 EP300Q09472 2414 aaPredicted RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 TMEM129A0AVI4 362 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 OR6C70A6NIJ9 312 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 B4E171 279 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ALG1L2C9J202 215 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 D6RAR5 112 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PRR23D1E9PI22 279 aaPredicted RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 M0R129 80 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CCRL2O00421 344 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 KPNA4O00629 521 aaPredicted RBP4.03□□□□□ -1.76
SRP54-212ENST00000556992 BHLHE40O14503 412 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 CDC42EP2O14613 210 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 IMPA2O14732 288 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 MYL12BO14950 172 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 ARPC3O15145 178 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 HCRTR2O43614 444 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 FADS1O60427 444 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 TSPAN2O60636 221 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 NDUFB2O95178 105 aa4.03□□□□□ -1.76
SRP54-212ENST00000556992 PTHP01270 115 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms