RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 USF3Q68DE3 2245 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 SLC35F4A4IF30 521 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 ZNF99A8MXY4 864 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-216ENST00000556682 M0R3G1 203 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 PLPP3O14495 311 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 TRAF3IP2O43734 574 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-216ENST00000556682 IGHV4-39P01824 125 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 ADORA3P0DMS8 318 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 CBR1P16152 277 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 HOXB4P17483 251 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-216ENST00000556682 PTNP21246 168 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 IFNA8P32881 189 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 ARR3P36575 388 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 ACVR1BP36896 505 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 CAPZA2P47755 286 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 NUDT6P53370 316 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 PPP2R2BQ00005 443 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 SF3A3Q12874 501 aaKnown RBP eCLIP9.42□□□□□ -0.9
XRCC3-216ENST00000556682 CEACAM16Q2WEN9 425 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 RABL3Q5HYI8 236 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 CARD17Q5XLA6 110 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 LINGO2Q7L985 606 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 CALHM3Q86XJ0 350 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 C20orf196Q8IYI0 205 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 IL17RDQ8NFM7 739 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 GPR32P1Q8NGA4 272 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 OR4F15Q8NGB8 312 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 OR6N1Q8NGY5 312 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 MOGAT1Q96PD6 335 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 RHNO1Q9BSD3 238 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 REG4Q9BYZ8 158 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 POLR2J2Q9GZM3 115 aaKnown RBP9.42□□□□□ -0.9
XRCC3-216ENST00000556682 PCDHAC1Q9H158 963 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 POLR2J3Q9H1A7 115 aaKnown RBP9.42□□□□□ -0.9
XRCC3-216ENST00000556682 ZNF446Q9NWS9 450 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 FBXO9Q9UK97 447 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-216ENST00000556682 SLC7A7Q9UM01 511 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 POFUT2Q9Y2G5 429 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 SH3GLB1Q9Y371 365 aa9.42□□□□□ -0.9
XRCC3-216ENST00000556682 MAP1AP78559 2803 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-216ENST00000556682 IGHV1-18A0A0C4DH31 117 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 ATP6V1G2-DDX39BF2Z307 99 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 H7C417 338 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 RNF13O43567 381 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 SSX4O60224 188 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 CCDC22O60826 627 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 ENTPD5O75356 428 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 SERPINI2O75830 405 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 CH25HO95992 272 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 HPRP00739 348 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 TP53P04637 393 aaPredicted RBP9.41□□□□□ -0.9
XRCC3-216ENST00000556682 UMPSP11172 480 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 HLA-DOBP13765 273 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 MDH1P40925 334 aaKnown RBP9.41□□□□□ -0.9
XRCC3-216ENST00000556682 TAS2R41P59536 307 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 NPTX1Q15818 432 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 ZNF74Q16587 644 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 B3GLCTQ6Y288 498 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 ARPINQ7Z6K5 226 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 CARM1Q86X55 608 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 RBM45Q8IUH3 476 aaKnown RBP9.41□□□□□ -0.9
XRCC3-216ENST00000556682 TMEM123Q8N131 208 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 OR2T12Q8NG77 320 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 RP9Q8TA86 221 aaKnown RBP9.41□□□□□ -0.9
XRCC3-216ENST00000556682 C10orf82Q8WW14 230 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 NANOS1Q8WY41 292 aaKnown RBP9.41□□□□□ -0.9
XRCC3-216ENST00000556682 LZICQ8WZA0 190 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 ZNF583Q96ND8 569 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 EMC6Q9BV81 110 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 ULBP2Q9BZM5 246 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 MED29Q9NX70 200 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 CRNNQ9UBG3 495 aaPredicted RBP9.41□□□□□ -0.9
XRCC3-216ENST00000556682 ZNF229Q9UJW7 825 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 GDF2Q9UK05 429 aaPredicted RBP9.41□□□□□ -0.9
XRCC3-216ENST00000556682 USP22Q9UPT9 525 aa9.41□□□□□ -0.9
XRCC3-216ENST00000556682 ELOVL7A1L3X0 281 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 FAM220BPB1ANY3 271 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 LRRN3E7EW58 273 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 C11orf98E9PRG8 122 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 FXYD1O00168 92 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 ATP8B1O43520 1251 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 NDUFS7O75251 213 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 OR5F1O95221 314 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 IGKV3-15P01624 115 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 IGLV1-44P01699 117 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 CSF3P09919 207 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 CECR9P0C854 216 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 IFNGR1P15260 489 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 SERPINF1P36955 418 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 RBM34P42696 430 aaKnown RBP9.4□□□□□ -0.9
XRCC3-216ENST00000556682 CSNK1A1P48729 337 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 SNRPD2P62316 118 aaKnown RBP9.4□□□□□ -0.9
XRCC3-216ENST00000556682 NAAAQ02083 359 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 ZP4Q12836 540 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 CAMK2DQ13557 499 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 C11orf71Q6IPW1 123 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 CGB2Q6NT52 195 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 CLEC2AQ6UVW9 174 aa9.4□□□□□ -0.9
XRCC3-216ENST00000556682 DEF8Q6ZN54 512 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms