RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 LINC00315P59091 139 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 BST2Q10589 180 aaKnown RBP2.73□□□□□ -1.97
SCFD1-221ENST00000556534 PPIL2Q13356 520 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 NRF1Q16656 503 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 ZNF691Q5VV52 312 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 RNASEKQ6P5S7 137 aaKnown RBP2.73□□□□□ -1.97
SCFD1-221ENST00000556534 ENPP6Q6UWR7 440 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 C6orf89Q6UWU4 347 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 GDPD3Q7L5L3 318 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 OR10G3Q8NGC4 313 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 OR52H1Q8NGJ2 320 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 MAIP1Q8WWC4 291 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 STARD4Q96DR4 205 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 FAM210BQ96KR6 192 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 OR11A1Q9GZK7 315 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 NCOR1P1Q9H4R4 102 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 ANKRD19PQ9H560 264 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 ANKRA2Q9H9E1 313 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 SLC2A8Q9NY64 477 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 PLEKHH1Q9ULM0 1364 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 PHLPP2Q6ZVD8 1323 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 RNF13O43567 381 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 DFNA5O60443 496 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 TNFSF13O75888 250 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 AGTP01019 485 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 P04436 131 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 ICAM2P13598 275 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 CD1CP29017 333 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 CASP14P31944 242 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 OPRD1P41143 372 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 EPS15P42566 896 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 KIR2DS4P43632 304 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 PLP1P60201 277 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 PAX5Q02548 391 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 ZNF77Q15935 545 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 DUSP7Q16829 419 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 KCTD19Q17RG1 926 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-221ENST00000556534 OR2G6Q5TZ20 316 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 CARD17Q5XLA6 110 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 PAQR7Q86WK9 346 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 TGIF2LXQ8IUE1 241 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 FTMTQ8N4E7 242 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 SPATA4Q8NEY3 305 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 OR6C4Q8NGE1 309 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 HTR3CQ8WXA8 447 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 ARPC1AQ92747 370 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 OXGR1Q96P68 337 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 PANX2Q96RD6 677 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 PANX1Q96RD7 426 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 RNF2Q99496 336 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 SLC17A9Q9BYT1 436 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 RAB34Q9BZG1 259 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 FAM192AQ9GZU8 254 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 SUDS3Q9H7L9 328 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-221ENST00000556534 FOLH1BQ9HBA9 442 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 EML4Q9HC35 981 aaKnown RBP2.72□□□□□ -1.97
SCFD1-221ENST00000556534 CRLF2Q9HC73 371 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 STAP1Q9ULZ2 295 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 PSG11Q9UQ72 335 aa2.72□□□□□ -1.97
SCFD1-221ENST00000556534 ASTN1O14525 1302 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 A0A075B6Q4 140 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 TCRBV9S1A1TA0A576 114 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 IDSB3KWA1 339 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 HSD17B6O14756 317 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 ANXA8P13928 327 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 COX5AP20674 150 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 ANXA13P27216 316 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 RDXP35241 583 aaKnown RBP2.71□□□□□ -1.98
SCFD1-221ENST00000556534 DDOSTP39656 456 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 CRYBB2P43320 205 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 GYG1P46976 350 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 CCR6P51684 374 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 DLX1P56177 255 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 MADCAM1Q13477 382 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 MICBQ29980 383 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 KLHL38Q2WGJ6 581 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 ALKBH6Q3KRA9 238 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 CARD16Q5EG05 197 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 ANXA8L1Q5VT79 327 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 TMIGD1Q6UXZ0 262 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 MFSD6LQ8IWD5 586 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 CCDC148Q8NFR7 591 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 NPBQ8NG41 125 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 OR9G1Q8NH87 305 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 TMEM158Q8WZ71 300 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 CNN2Q99439 309 aaKnown RBP2.71□□□□□ -1.98
SCFD1-221ENST00000556534 P2RY13Q9BPV8 354 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 NMRAL1Q9HBL8 299 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 NEK6Q9HC98 313 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 NT5MQ9NPB1 228 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 KLHL28Q9NXS3 571 aa2.71□□□□□ -1.98
SCFD1-221ENST00000556534 PHF3Q92576 2039 aaKnown RBP2.7□□□□□ -1.98
SCFD1-221ENST00000556534 NCF1BA6NI72 391 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-221ENST00000556534 LRRIQ4A6NIV6 560 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 NCF1CA8MVU1 366 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-221ENST00000556534 TCP11X1B4DZS4 312 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 PES1O00541 588 aaKnown RBP2.7□□□□□ -1.98
SCFD1-221ENST00000556534 ICOSLGO75144 302 aa2.7□□□□□ -1.98
SCFD1-221ENST00000556534 WISP3O95389 354 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-221ENST00000556534 TMEM50AO95807 157 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms