RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ZMAT3Q9HA38 289 aaKnown RBP13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 ZNF850A8MQ14 1090 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 TRHRP34981 398 aaPredicted RBP13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 GNMTQ14749 295 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 TCEAL6Q6IPX3 200 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 UNQ6126/PRO20091Q6UXV3 157 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 RTL10Q7L3V2 364 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 SLC16A9Q7RTY1 509 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 AMER3Q8N944 861 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 OR8D4Q8NGM9 314 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 ST6GALNAC5Q9BVH7 336 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 DZANK1Q9NVP4 752 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 KLK11Q9UBX7 282 aa13.83□□□□□ -0.2
ARHGEF40-207ENST00000556399 VSTM2BA6NLU5 285 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 TBX19O60806 448 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 TLE3Q04726 772 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 OR4D11Q8NGI4 311 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 DIO2Q92813 273 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 FAM71F1Q96KD3 344 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 BMFQ96LC9 184 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 POFUT1Q9H488 388 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 HCFC2Q9Y5Z7 792 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 TRIP12Q14669 1992 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 ZNF264O43296 627 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 MSL3P1P0C860 447 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 SPI1P17947 270 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 NFATC4Q14934 902 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 RNLSQ5VYX0 342 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 PLPP7Q8NBV4 271 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 HOXB13Q92826 284 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 PRRG4Q9BZD6 226 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 RPS10P5Q9NQ39 176 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 LSM5Q9Y4Y9 91 aaKnown RBP13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 SEMG1P04279 462 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 TACR3P29371 465 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 CD79BP40259 229 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 CCR2P41597 374 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 ARRB1P49407 418 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 DIO1P49895 249 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 MAT1AQ00266 395 aaKnown RBP13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 ZNF362Q5T0B9 420 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 OR5M10Q6IEU7 315 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 LIX1LQ8IVB5 337 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 ZG16BQ96DA0 208 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 SORCS2Q96PQ0 1159 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 WDR77Q9BQA1 342 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 GPATCH2Q9NW75 528 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 A0A0A6YYH2 397 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 TRAV1-2A0A0B4J238 106 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 LOC100289279A0A1B0GTE1 492 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 CIB4A0PJX0 185 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 A6NJ64 397 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 GMDSO60547 372 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 SLC35E2P0CK97 266 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 ATF1P18846 271 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 DCTDP32321 178 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 METAP1P53582 386 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 CBFBQ13951 182 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 CDKN3Q16667 212 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 ST3GAL2Q16842 350 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 TRMT61AQ96FX7 289 aaKnown RBP13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 HIST1H2AAQ96QV6 131 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 PTGES2Q9H7Z7 377 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 SLC2A4RGQ9NR83 387 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 PPP4R1LQ9P1A2 415 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 SCN4AP35499 1836 aa13.82□□□□□ -0.2
ARHGEF40-207ENST00000556399 A0A0B4J2A0 478 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 OR2T1O43869 369 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 ZNF28P17035 718 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 GALP22466 123 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 MEP1BQ16820 701 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 OR51T1Q8NGJ9 327 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 BADQ92934 168 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 SLC6A20Q9NP91 592 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 SIRT3Q9NTG7 399 aaPredicted RBP13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 SHPKQ9UHJ6 478 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 KIF25Q9UIL4 384 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 CXorf51AA0A1B0GTR3 108 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 GGT3PA6NGU5 568 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 A6NIZ1 184 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 EFCAB7A8K855 629 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 THEGLP0DJG4 465 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 SLC6A1P30531 599 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 RABIFP47224 123 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 RAP1BP61224 184 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 RAP1AP62834 184 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 HSD11B2P80365 405 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 C1orf189Q5VU69 101 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 LRRC69Q6ZNQ3 347 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 OR5D14Q8NGL3 314 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 SLC25A21Q9BQT8 299 aaPredicted RBP13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 FBRSQ9HAH7 460 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 EXOGQ9Y2C4 368 aaKnown RBP13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 MYO9BQ13459 2157 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 DOK2O60496 412 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 GLYATL3Q5SZD4 288 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 NPRL2Q8WTW4 380 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 ARPC5LQ9BPX5 153 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 SCML1Q9UN30 329 aa13.81□□□□□ -0.2
ARHGEF40-207ENST00000556399 D6RAR5 112 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms