RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PUDPQ08623 228 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 FHL1Q13642 323 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 TRAM2Q15035 370 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 TSC22D1Q15714 1073 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 LCN8Q6JVE9 175 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 SEZ6L2Q6UXD5 910 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 CASP12Q6UXS9 341 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 AAED1Q7RTV5 226 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 PXKQ7Z7A4 578 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 TMEM123Q8N131 208 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 C10orf53Q8N6V4 93 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 STEAP2Q8NFT2 490 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 SLC7A13Q8TCU3 470 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 ACOT11Q8WXI4 607 aaPredicted RBP8.5□□□□□ -1.05
SRP54-210ENST00000556380 THTPAQ9BU02 230 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 FNDC11Q9BVV2 318 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 ASPNQ9BXN1 380 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 ACTR6Q9GZN1 396 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 MUC13Q9H3R2 512 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 ANKRD19PQ9H560 264 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 IL1RAPQ9NPH3 570 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 NANSQ9NR45 359 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 RASSF1Q9NS23 344 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 RHCGQ9UBD6 479 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 RCE1Q9Y256 329 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 MED31Q9Y3C7 131 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 A0A1W2PRQ8 180 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 hCG_2039718K7EN88 272 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 PIP5K1CO60331 668 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 UPK3AO75631 287 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 LYZL6O75951 148 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 OR7A10O76100 309 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 HRGP04196 525 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 FUT1P19526 365 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 MAKP20794 623 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 GTF2E2P29084 291 aaKnown RBP8.49□□□□□ -1.05
SRP54-210ENST00000556380 IFNA8P32881 189 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 CLDN17P56750 224 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 PRKCDQ05655 676 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 LGALS3BPQ08380 585 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 FAPQ12884 760 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 DGCR6Q14129 220 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 GABRA6Q16445 453 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 MTX3Q5HYI7 312 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 PODNL1Q6PEZ8 512 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 TBPL2Q6SJ96 375 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 CYP2R1Q6VVX0 501 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 MBOAT2Q6ZWT7 520 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 LINGO2Q7L985 606 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 BHLHA15Q7RTS1 189 aaPredicted RBP8.49□□□□□ -1.05
SRP54-210ENST00000556380 PIWIL3Q7Z3Z3 882 aaKnown RBP8.49□□□□□ -1.05
SRP54-210ENST00000556380 UEVLDQ8IX04 471 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 NRMQ8IXM6 262 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 RNF113BQ8IZP6 322 aaKnown RBP8.49□□□□□ -1.05
SRP54-210ENST00000556380 POMGNT2Q8NAT1 580 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 HSD17B8Q92506 261 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 KISS1RQ969F8 398 aaPredicted RBP8.49□□□□□ -1.05
SRP54-210ENST00000556380 POP5Q969H6 163 aaKnown RBP8.49□□□□□ -1.05
SRP54-210ENST00000556380 S100PBPQ96BU1 408 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 SGTBQ96EQ0 304 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 BOD1Q96IK1 185 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 TXNDC15Q96J42 360 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 MUS81Q96NY9 551 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 OR2M2Q96R28 347 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 PIP5K1AQ99755 562 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 BTBD10Q9BSF8 475 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 MED18Q9BUE0 208 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 LINC00470Q9BZP3 86 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 SLCO5A1Q9H2Y9 848 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 ASB6Q9NWX5 421 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 NOX1Q9Y5S8 564 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 V9GYQ6 96 aa8.49□□□□□ -1.05
SRP54-210ENST00000556380 A0A1W2PPR1 153 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 OR6C65A6NJZ3 312 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 RPL36A-HNRNPH2H7BZ11 118 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 GYG2O15488 501 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 GSC2O15499 205 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 DIRAS1O95057 198 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 GOSR1O95249 250 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 HIST1H2ABP04908 130 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 H1F0P07305 194 aaKnown RBP8.48□□□□□ -1.05
SRP54-210ENST00000556380 ADORA3P0DMS8 318 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 NQO1P15559 274 aaKnown RBP8.48□□□□□ -1.05
SRP54-210ENST00000556380 IL32P24001 234 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 MPGP29372 298 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 MAGEA2P43356 314 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 POU3F1Q03052 451 aaPredicted RBP8.48□□□□□ -1.05
SRP54-210ENST00000556380 TRAP1Q12931 704 aaKnown RBP8.48□□□□□ -1.05
SRP54-210ENST00000556380 FOXD4Q12950 439 aaPredicted RBP8.48□□□□□ -1.05
SRP54-210ENST00000556380 C1DQ13901 141 aaKnown RBP8.48□□□□□ -1.05
SRP54-210ENST00000556380 SEC23BQ15437 767 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 TAB1Q15750 504 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 DNAL1Q4LDG9 190 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 PHYHD1Q5SRE7 291 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 NIPAL3Q6P499 406 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 TMPRSS11FQ6ZWK6 438 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 HIST3H2AQ7L7L0 130 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 CYP4Z1Q86W10 505 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 DHFR2Q86XF0 187 aa8.48□□□□□ -1.05
SRP54-210ENST00000556380 MEX3DQ86XN8 651 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms