RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 IQCF1Q8N6M8 205 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 ARIH2OSQ8N7S6 290 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 TCEANCQ8N8B7 351 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 Q8NA96 180 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 LRRC75AQ8NAA5 344 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 LSM14AQ8ND56 463 aaKnown RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 OR52E2Q8NGJ4 325 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 OR4Q3Q8NH05 313 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 RHOXF1Q8NHV9 184 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 OTULINQ96BN8 352 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 SNRNP40Q96DI7 357 aaKnown RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 CRELD1Q96HD1 420 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 CNTNAP3BQ96NU0 1288 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 NR1H4Q96RI1 486 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 MYCBPQ99417 103 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-218ENST00000556343 ALG12Q9BV10 488 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 SRXN1Q9BYN0 137 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 CNTNAP3Q9BZ76 1288 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 CALHM2Q9HA72 323 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 GP6Q9HCN6 339 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 RASSF1Q9NS23 344 aa8.24□□□□□ -1.09
ACTN1-218ENST00000556343 EML6Q6ZMW3 1958 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 IGHV3-15A0A0B4J1V0 119 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 TEX13CA0A0J9YWL9 993 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CLCA1A8K7I4 914 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 ZNF724A8MTY0 619 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 H0YC42 278 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 ARHGEF9O43307 516 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CLIC3O95833 236 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 IGHG1P01857 330 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 TPOP07202 933 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 GNAO1P09471 354 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 IFNGR1P15260 489 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 EPHA2P29317 976 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CRABP1P29762 137 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 BLVRAP53004 296 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 SLC16A1P53985 500 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 BIDP55957 195 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CLRN1P58418 232 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 FXYD6P3P58550 94 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CXCR4P61073 352 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 ISL1P61371 349 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CDK5R2Q13319 367 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 KRR1Q13601 381 aaKnown RBP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 FHL1Q13642 323 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 SLC17A1Q14916 467 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 MAD2L1BPQ15013 274 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 OCLNQ16625 522 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 GXYLT1Q4G148 440 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 RBM48Q5RL73 367 aaKnown RBP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 TMEM201Q5SNT2 666 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 C6orf141Q5SZD1 244 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 LCN1P1Q5VSP4 162 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 EEF1A1P5Q5VTE0 462 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 NXNL2Q5VZ03 156 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 ZNF324BQ6AW86 544 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 ZNF585AQ6P3V2 769 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 LEG1Q6P5S2 330 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CREB3L2Q70SY1 520 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CXXC5Q7LFL8 322 aaKnown RBP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CCDC103Q8IW40 242 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 ENTHD1Q8IYW4 607 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 KDM8Q8N371 416 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 OR9K2Q8NGE7 335 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 OR4K13Q8NH42 304 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 OR6X1Q8NH79 312 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 FAM57AQ8TBR7 257 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 ROBO4Q8WZ75 1007 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 HDAC2Q92769 488 aaKnown RBP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 WNT2BQ93097 391 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 ZNF845Q96IR2 970 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 LRR1Q96L50 414 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 Q96M85 177 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 TSPAN32Q96QS1 320 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 UCN2Q96RP3 112 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 IL4I1Q96RQ9 567 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 TRIB1Q96RU8 372 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 TM9SF2Q99805 663 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 TUBA1CQ9BQE3 449 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 RNF122Q9H9V4 155 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 B3GAT2Q9NPZ5 323 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 KLHL13Q9P2N7 655 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 RNF6Q9Y252 685 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 RCE1Q9Y256 329 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 TPRKBQ9Y3C4 175 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 RPL36Q9Y3U8 105 aaKnown RBP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 TPRP12270 2363 aaKnown RBP8.23□□□□□ -1.09
ACTN1-218ENST00000556343 CFAP47Q6ZTR5 3102 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 PCNX3Q9H6A9 2034 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 ACACBO00763 2458 aa8.23□□□□□ -1.09
ACTN1-218ENST00000556343 PRSS37A4D1T9 235 aa8.22□□□□□ -1.09
ACTN1-218ENST00000556343 SLC22A31A6NKX4 558 aa8.22□□□□□ -1.09
ACTN1-218ENST00000556343 SMAD9O15198 467 aaKnown RBP8.22□□□□□ -1.09
ACTN1-218ENST00000556343 PRODHO43272 600 aa8.22□□□□□ -1.09
ACTN1-218ENST00000556343 SLC43A1O75387 559 aa8.22□□□□□ -1.09
ACTN1-218ENST00000556343 MRPL33O75394 65 aaKnown RBP8.22□□□□□ -1.09
ACTN1-218ENST00000556343 TNFAIP8O95379 198 aa8.22□□□□□ -1.09
ACTN1-218ENST00000556343 YES1P07947 543 aa8.22□□□□□ -1.09
ACTN1-218ENST00000556343 HIST1H1CP16403 213 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms