RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 EFNA3P52797 238 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 EFNB1P98172 346 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 EGR3Q06889 387 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 RAB40BQ12829 278 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 SKP2Q13309 424 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 IRF3Q14653 427 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 TIGD6Q17RP2 521 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 SYT14P1Q58G82 188 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 CLEC12AQ5QGZ9 265 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 DCAF12Q5T6F0 453 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 FNDC7Q5VTL7 733 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 RNLSQ5VYX0 342 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 MBNL2Q5VZF2 373 aaKnown RBP6.18□□□□□ -1.42
SLIRP-204ENST00000555890 PAPD4Q6PIY7 484 aaKnown RBP6.18□□□□□ -1.42
SLIRP-204ENST00000555890 SMARCD3Q6STE5 483 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 TMEM205Q6UW68 189 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 KIRREL2Q6UWL6 708 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 CLEC9AQ6UXN8 241 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 WDR88Q6ZMY6 472 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 RTL4Q6ZR62 310 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ZNF367Q7RTV3 350 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 OAFQ86UD1 273 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 VASH2Q86V25 355 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 DTX1Q86Y01 620 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ANKRD13BQ86YJ7 626 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 MISPQ8IVT2 679 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 BMPERQ8N8U9 685 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ZNF441Q8N8Z8 693 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 GATSQ8NAP1 163 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 FAM71CQ8NEG0 241 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 OR8D4Q8NGM9 314 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 OR4Q3Q8NH05 313 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 PFN4Q8NHR9 129 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 PPP1R35Q8TAP8 253 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 FANK1Q8TC84 345 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ZFAND2BQ8WV99 257 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 TMCO6Q96DC7 493 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 YIPF6Q96EC8 236 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 LRR1Q96L50 414 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 SGCZQ96LD1 299 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 COG8Q96MW5 612 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ZNF582Q96NG8 517 aaPredicted RBP6.18□□□□□ -1.42
SLIRP-204ENST00000555890 LMF1Q96S06 567 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ZPBPQ9BS86 351 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ZNF426Q9BUY5 554 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 IFT27Q9BW83 186 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 FUNDC2Q9BWH2 189 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 PLA2G12AQ9BZM1 189 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 NDEL1Q9GZM8 345 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 RACGAP1Q9H0H5 632 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 OR52D1Q9H346 318 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 UBQLN3Q9H347 655 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 FN3KQ9H479 309 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 GPN2Q9H9Y4 310 aaPredicted RBP6.18□□□□□ -1.42
SLIRP-204ENST00000555890 C12orf10Q9HB07 376 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 HHATLQ9HCP6 504 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ENPP5Q9UJA9 477 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ERGIC3Q9Y282 383 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 CARD8Q9Y2G2 431 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 PCDHGB6Q9Y5F9 930 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 EXPH5Q8NEV8 1989 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 POLEQ07864 2286 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 TRBV11-1A0A0K0K1C0 115 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 RIIAD1A6NNX1 92 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 CDC42EP2O14613 210 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 HCRTR2O43614 444 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 PTP4A3O75365 173 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 NDUFB2O95178 105 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 NTN1O95631 604 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 RAB36O95755 333 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 CH25HO95992 272 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 BCL10O95999 233 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 IGF2P01344 180 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 IFNGP01579 166 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 LCKP06239 509 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 CLEC2LP0C7M8 214 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 CCL4P13236 92 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 MYL12AP19105 171 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 HK1P19367 917 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 FUT1P19526 365 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 ACVR2AP27037 513 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 ABCD3P28288 659 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 PCSK6P29122 969 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 FOLR3P41439 243 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 SLC1A3P43003 542 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 MTNR1AP48039 350 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 TMED10P49755 219 aaKnown RBP6.17□□□□□ -1.42
SLIRP-204ENST00000555890 CDH11P55287 796 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 SLC26A5P58743 744 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 KRTAP10-9P60411 292 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 ZNF91Q05481 1191 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 CRYZQ08257 329 aaKnown RBP6.17□□□□□ -1.42
SLIRP-204ENST00000555890 DYNC1I2Q13409 638 aaKnown RBP6.17□□□□□ -1.42
SLIRP-204ENST00000555890 C1DQ13901 141 aaKnown RBP6.17□□□□□ -1.42
SLIRP-204ENST00000555890 CBFBQ13951 182 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 CD226Q15762 336 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 NDUFAF6Q330K2 333 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 ANKDD1AQ495B1 522 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 EMC4Q5J8M3 183 aa6.17□□□□□ -1.42
SLIRP-204ENST00000555890 NXNL2Q5VZ03 156 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms