RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 NUP50Q9UKX7 468 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 PLEKHG1Q9ULL1 1385 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 AGRNO00468 2067 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 SMCO3A2RU48 225 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 DYNC1I1O14576 645 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 GOSR2O14653 212 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 PPP1R2P9O14990 202 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 C1orf105O95561 183 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 KLF8O95600 359 aaPredicted RBP3.77□□□□□ -1.81
VRK1-205ENST00000555402 HPNP05981 417 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 VHLP40337 213 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 YAP1P46937 504 aaKnown RBP3.77□□□□□ -1.81
VRK1-205ENST00000555402 IDI1Q13907 227 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 ZNF79Q15937 498 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 NRF1Q16656 503 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 VPS26BQ4G0F5 336 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 CARD17Q5XLA6 110 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 TRIM40Q6P9F5 258 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 NEIL3Q8TAT5 605 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 GIMAP1Q8WWP7 306 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 SMARCD2Q92925 531 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 IMMP1LQ96LU5 166 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 TSNARE1Q96NA8 513 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 MBOAT4Q96T53 435 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 FAIM2Q9BWQ8 316 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 TMEM59Q9BXS4 323 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 LY9Q9HBG7 655 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 DDX18Q9NVP1 670 aaKnown RBP3.77□□□□□ -1.81
VRK1-205ENST00000555402 MTRF1LQ9UGC7 380 aaKnown RBP3.77□□□□□ -1.81
VRK1-205ENST00000555402 STARD10Q9Y365 291 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 KIF25-AS1Q9Y6Z4 181 aa3.77□□□□□ -1.81
VRK1-205ENST00000555402 IGLV3-22A0A075B6J6 115 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 SOX15O60248 233 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 AGTP01019 485 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 FGF1P05230 155 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 C2P06681 752 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 CRYGBP07316 175 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 ZNF24P17028 368 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 TCN1P20061 433 aaPredicted RBP3.76□□□□□ -1.81
VRK1-205ENST00000555402 HTR1EP28566 365 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 PRDX3P30048 256 aaKnown RBP3.76□□□□□ -1.81
VRK1-205ENST00000555402 RORAP35398 523 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 LYZP61626 148 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 ACVR1Q04771 509 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 TGM3Q08188 693 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 CYTH1Q15438 398 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 XKR7Q5GH72 579 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 PRAMEF20Q5VT98 475 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 RAET1LQ5VY80 246 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 OTPQ5XKR4 325 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 C16orf87Q6PH81 154 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 CNIH2Q6PI25 160 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 METAP1DQ6UB28 335 aaPredicted RBP3.76□□□□□ -1.81
VRK1-205ENST00000555402 C11orf53Q8IXP5 236 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 PIANPQ8IYJ0 282 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 ACOT11Q8WXI4 607 aaPredicted RBP3.76□□□□□ -1.81
VRK1-205ENST00000555402 PDFQ9HBH1 243 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 RAB20Q9NX57 234 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 SLC25A15Q9Y619 301 aa3.76□□□□□ -1.81
VRK1-205ENST00000555402 CDHR2Q9BYE9 1310 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 PHF3Q92576 2039 aaKnown RBP3.75□□□□□ -1.81
VRK1-205ENST00000555402 KIR2DL5BA0A0G2JN68 375 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 KIR2DL5BA0A0G2JPC4 375 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 PSMB11A5LHX3 300 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 USP27XA6NNY8 438 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 C12orf71A8MTZ7 269 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 C12orf77C9JDV5 145 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 CCL21O00585 134 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 MGRN1O60291 552 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 PABPC4LP0CB38 370 aaKnown RBP3.75□□□□□ -1.81
VRK1-205ENST00000555402 ICAM2P13598 275 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 ZNF19P17023 458 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 BTCP35070 178 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 PRRX1P54821 245 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 CDH6P55285 790 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 FBXW4P57775 412 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 ZNF630Q2M218 657 aaPredicted RBP3.75□□□□□ -1.81
VRK1-205ENST00000555402 ANGPTL8Q6UXH0 198 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 MFSD6LQ8IWD5 586 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 KIR2DL5AQ8N109 375 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 DCAF4L2Q8NA75 395 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 C20orf203Q8NBC4 194 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 B3GNT7Q8NFL0 401 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 KIR2DL5BQ8NHK3 375 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 PLPPR1Q8TBJ4 325 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 FRAT1Q92837 279 aaPredicted RBP3.75□□□□□ -1.81
VRK1-205ENST00000555402 MED8Q96G25 268 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 FCRL1Q96LA6 429 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 RASL11BQ9BPW5 248 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 TMEM246Q9BRR3 403 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 RIOK2Q9BVS4 552 aaKnown RBP3.75□□□□□ -1.81
VRK1-205ENST00000555402 ILKAPQ9H0C8 392 aaPredicted RBP3.75□□□□□ -1.81
VRK1-205ENST00000555402 RANBP3Q9H6Z4 567 aaPredicted RBP3.75□□□□□ -1.81
VRK1-205ENST00000555402 INPP5EQ9NRR6 644 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 GLRX2Q9NS18 164 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 CALYQ9NYX4 217 aa3.75□□□□□ -1.81
VRK1-205ENST00000555402 A0A075B6Q4 140 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 LRRIQ4A6NIV6 560 aa3.74□□□□□ -1.81
VRK1-205ENST00000555402 C9JVG2 144 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms