RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 OR2M2Q96R28 347 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 PRSS27Q9BQR3 290 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 LINC00470Q9BZP3 86 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 LIME1Q9H400 295 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 CCM2LQ9NUG4 571 aaPredicted RBP10.64□□□□□ -0.71
SRP54-206ENST00000555317 DCAF13Q9NV06 445 aaKnown RBP10.64□□□□□ -0.71
SRP54-206ENST00000555317 RHCGQ9UBD6 479 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 A4GNTQ9UNA3 340 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 SNX13Q9Y5W8 968 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 V9GYQ6 96 aa10.64□□□□□ -0.71
SRP54-206ENST00000555317 A0A1W2PR80 420 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 SLC35F4A4IF30 521 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 HTR3EA5X5Y0 456 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 M0R1B8 84 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 M0R3G1 203 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 ARPC2O15144 300 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 UPK3AO75631 287 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 ZNF432O94892 652 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 STAMBPO95630 424 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 IGF2P01344 180 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 SAGP10523 405 aaPredicted RBP10.63□□□□□ -0.71
SRP54-206ENST00000555317 IFI30P13284 250 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 HLA-DOBP13765 273 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 IFNGR1P15260 489 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 FUT1P19526 365 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 ZNF83P51522 516 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 IST1P53990 364 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 BIDP55957 195 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 PRPS1P60891 318 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 BSPH1Q075Z2 132 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 LGALS3BPQ08380 585 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 CAMK2DQ13557 499 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 NCMAPQ5T1S8 102 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 C1QTNF12Q5T7M4 302 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 SLC35D2Q76EJ3 337 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 ARHGAP24Q8N264 748 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 DEPDC4Q8N2C3 294 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 LRRC17Q8N6Y2 441 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 RBM15BQ8NDT2 890 aaKnown RBP10.63□□□□□ -0.71
SRP54-206ENST00000555317 MUS81Q96NY9 551 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 CCL19Q99731 98 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 EMC6Q9BV81 110 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 NDEL1Q9GZM8 345 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 GORASP2Q9H8Y8 452 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 CRLF2Q9HC73 371 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 OBP2BQ9NPH6 170 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 KRCC1Q9NPI7 259 aaPredicted RBP10.63□□□□□ -0.71
SRP54-206ENST00000555317 MEPEQ9NQ76 525 aaPredicted RBP10.63□□□□□ -0.71
SRP54-206ENST00000555317 SLC17A5Q9NRA2 495 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 MED29Q9NX70 200 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 ENPP4Q9Y6X5 453 aa10.63□□□□□ -0.71
SRP54-206ENST00000555317 F8P00451 2351 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 A0A1W2PPR1 153 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 J3KTA2 159 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 ABCD4O14678 606 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 PIP5K1CO60331 668 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 ATE1O95260 518 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 BCL10O95999 233 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 H1F0P07305 194 aaKnown RBP10.62□□□□□ -0.71
SRP54-206ENST00000555317 ASAH2BP0C7U1 165 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 RHCEP18577 417 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 MSX2P35548 267 aaPredicted RBP10.62□□□□□ -0.71
SRP54-206ENST00000555317 CAPZA2P47755 286 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 CSNK1A1P48729 337 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 DAP3P51398 398 aaKnown RBP10.62□□□□□ -0.71
SRP54-206ENST00000555317 FOXG1P55316 489 aaPredicted RBP10.62□□□□□ -0.71
SRP54-206ENST00000555317 ZP4Q12836 540 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 TAF11Q15544 211 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 ACKR1Q16570 336 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 HIKESHIQ53FT3 197 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 FGD3Q5JSP0 725 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 ANKRD16Q6P6B7 361 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 TRPM8Q7Z2W7 1104 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 SLC46A3Q7Z3Q1 461 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 NRMQ8IXM6 262 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 C20orf196Q8IYI0 205 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 TMEM123Q8N131 208 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 OR1K1Q8NGR3 316 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 ACOT11Q8WXI4 607 aaPredicted RBP10.62□□□□□ -0.71
SRP54-206ENST00000555317 AKAP1Q92667 903 aaKnown RBP eCLIP10.62□□□□□ -0.71
SRP54-206ENST00000555317 PIGTQ969N2 578 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 ZNF566Q969W8 418 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 BPIFA2Q96DR5 249 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 PYURFQ96I23 114 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 TXNDC15Q96J42 360 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 RADILQ96JH8 1075 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 LRR1Q96L50 414 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 KCNS3Q9BQ31 491 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 ULBP2Q9BZM5 246 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 ANKRD19PQ9H560 264 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 GPR35Q9HC97 309 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 MOV10Q9HCE1 1003 aaKnown RBP10.62□□□□□ -0.71
SRP54-206ENST00000555317 C20orf141Q9NUB4 165 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 TAS2R5Q9NYW4 299 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 STX18Q9P2W9 335 aaKnown RBP10.62□□□□□ -0.71
SRP54-206ENST00000555317 CD300AQ9UGN4 299 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 POU2F3Q9UKI9 436 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 MGAT4BQ9UQ53 548 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 POFUT2Q9Y2G5 429 aa10.62□□□□□ -0.71
SRP54-206ENST00000555317 SLC25A15Q9Y619 301 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms