RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 SLC22A16Q86VW1 577 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 OR4N5Q8IXE1 308 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 BEST3Q8N1M1 668 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 PARP16Q8N5Y8 322 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 LSMEM1Q8N8F7 131 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ZNF527Q8NB42 609 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 OR7G1Q8NGA0 311 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 OR52R1Q8NGF1 315 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 OR4Q3Q8NH05 313 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 DNAJA4Q8WW22 397 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-216ENST00000554975 RIT1Q92963 219 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 NINJ1Q92982 152 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ANKRD9Q96BM1 317 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-216ENST00000554975 RBM18Q96H35 190 aaKnown RBP10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ART5Q96L15 291 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 OR1F2PQ96R84 312 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 PRSS27Q9BQR3 290 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 CNPPD1Q9BV87 410 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ALOXE3Q9BYJ1 711 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 SLC19A3Q9BZV2 496 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 HOXD1Q9GZZ0 328 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ZNF700Q9H0M5 742 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 UBQLN3Q9H347 655 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 TXNL4BQ9NX01 149 aaKnown RBP10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ANKRD10Q9NXR5 420 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 STMN3Q9NZ72 180 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 CLEC2DQ9UHP7 191 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ST6GALNAC2Q9UJ37 374 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 KLHL21Q9UJP4 597 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 PLEKHA6Q9Y2H5 1048 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 GRIP1Q9Y3R0 1128 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 RGS5O15539 181 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 PIP5K1CO60331 668 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 DNAJB6O75190 326 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 KCNK2O95069 426 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 CYC1P08574 325 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ICAM2P13598 275 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 FOSL1P15407 271 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 HK1P19367 917 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 DRD5P21918 477 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 TGFBR1P36897 503 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 PSMD7P51665 324 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ID2Q02363 134 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 MGAT2Q10469 447 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 EXOSC7Q15024 291 aaKnown RBP10.05□□□□□ -0.8
SHMT2-216ENST00000554975 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.05□□□□□ -0.8
SHMT2-216ENST00000554975 BTBD16Q32M84 506 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 CLEC12AQ5QGZ9 265 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 CCNJQ5T5M9 372 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ULK3Q6PHR2 472 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 METAP1DQ6UB28 335 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-216ENST00000554975 WDR53Q7Z5U6 358 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-216ENST00000554975 BTLAQ7Z6A9 289 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ANKRD37Q7Z713 158 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 HMGN2P46Q86SG4 172 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 RPRMLQ8N4K4 120 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ACBD7Q8N6N7 88 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ZNF614Q8N883 585 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 RNF217Q8TC41 542 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 HAVCR2Q8TDQ0 301 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ACOT12Q8WYK0 555 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 TSLPQ969D9 159 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 BPIFA2Q96DR5 249 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ARSGQ96EG1 525 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 SAMD8Q96LT4 415 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 IMMP1LQ96LU5 166 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 VSTM2LQ96N03 204 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 PTCHD1Q96NR3 888 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ZNF426Q9BUY5 554 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 HINT3Q9NQE9 182 aaKnown RBP10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ERVK13-1Q9NX77 482 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 DNAJB12Q9NXW2 375 aaKnown RBP10.05□□□□□ -0.8
SHMT2-216ENST00000554975 NPAP1Q9NZP6 1156 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 ZANQ9Y493 2812 aa10.05□□□□□ -0.8
SHMT2-216ENST00000554975 LOC102723996A0A087X1L8 192 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 BHLHE40O14503 412 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 RGS9O75916 674 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-216ENST00000554975 CDRT1O95170 752 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 NDUFB2O95178 105 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 MT-ND5P03915 603 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 HOXD4P09016 255 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-216ENST00000554975 LIMS3P0CW19 117 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 LIMS4P0CW20 117 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 HTR2AP28223 471 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 ATP12AP54707 1039 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 ACTA2P62736 377 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 ACTG2P63267 376 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 MYBPHQ13203 477 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 ALG10BQ5I7T1 473 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 STEAP3Q658P3 488 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 SPINK14Q6IE38 97 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 FIGNL1Q6PIW4 674 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 PAPD4Q6PIY7 484 aaKnown RBP10.04□□□□□ -0.8
SHMT2-216ENST00000554975 PAMR1Q6UXH9 720 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 MEPCEQ7L2J0 689 aaKnown RBP10.04□□□□□ -0.8
SHMT2-216ENST00000554975 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-216ENST00000554975 GHDCQ8N2G8 530 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 GDPD1Q8N9F7 314 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 POMGNT2Q8NAT1 580 aa10.04□□□□□ -0.8
SHMT2-216ENST00000554975 WFDC11Q8NEX6 87 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms