RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CLRN3Q8NCR9 226 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 OR1K1Q8NGR3 316 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 ADAMTS15Q8TE58 950 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 TSPEARQ8WU66 669 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 C22orf15Q8WYQ4 148 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 JADE3Q92613 823 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 BCL2L2Q92843 193 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-229ENST00000554672 PMM1Q92871 262 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 SLC25A28Q96A46 364 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 TMEM45BQ96B21 275 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 AURKBQ96GD4 344 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-229ENST00000554672 METTL2AQ96IZ6 378 aaKnown RBP4.12□□□□□ -1.75
ATXN3-229ENST00000554672 ERP44Q9BS26 406 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 SF3B5Q9BWJ5 86 aaKnown RBP4.12□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF416Q9BWM5 594 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 MRPL46Q9H2W6 279 aaKnown RBP4.12□□□□□ -1.75
ATXN3-229ENST00000554672 MMP27Q9H306 513 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF665Q9H7R5 613 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 SH3BP4Q9P0V3 963 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 TMEM181Q9P2C4 612 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 TESQ9UGI8 421 aaKnown RBP4.12□□□□□ -1.75
ATXN3-229ENST00000554672 CHRNA9Q9UGM1 479 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 STK38LQ9Y2H1 464 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 CMAHPQ9Y471 501 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 MMP24Q9Y5R2 645 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 FLVCR1Q9Y5Y0 555 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 TRRAPQ9Y4A5 3859 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 TENM1Q9UKZ4 2725 aa4.12□□□□□ -1.75
ATXN3-229ENST00000554672 IGHV2OR16-5A0A0B4J2B6 119 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 A8MT66 165 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF587BE7ETH6 402 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CCDC188H7C350 402 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 M0QZ24 198 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 M0R233 179 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 NR5A2O00482 541 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 TIMM23O14925 209 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 TBX19O60806 448 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 LGI1O95970 557 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 IGKV3-15P01624 115 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 HMGN2P05204 90 aaKnown RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 KRT16P08779 473 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 TCP1P17987 556 aaKnown RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 TCN1P20061 433 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 TAC1P20366 129 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 IMPDH1P20839 514 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ARR3P36575 388 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 FRKP42685 505 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 MAGEA12P43365 314 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ASMTP46597 345 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 HTR6P50406 440 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 MAP2K6P52564 334 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 PKNOX1P55347 436 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CLRN1P58418 232 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 DAG1Q14118 895 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 LASP1Q14847 261 aaKnown RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 UAP1Q16222 522 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 IMPG1Q17R60 797 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 MMEL1Q495T6 779 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF678Q5SXM1 525 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF362Q5T0B9 420 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 TEX35Q5T0J7 233 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 DCST2Q5T1A1 773 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 DCAF12L2Q5VW00 463 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 FAM219BQ5XKK7 198 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ANKRD26P1Q6NSI1 321 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CDC73Q6P1J9 531 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 C17orf107Q6ZR85 190 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 EIF3MQ7L2H7 374 aaKnown RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF572Q7Z3I7 529 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 GRINAQ7Z429 371 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CCDC36Q8IYA8 594 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CDK20Q8IZL9 346 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 SLC35F6Q8N357 371 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ZIC4Q8N9L1 334 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 OR56A1Q8NGH5 318 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF563Q8TA94 476 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 DCAKDQ8WVC6 231 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CDS1Q92903 461 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 YIPF5Q969M3 257 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CIDECQ96AQ7 238 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 PPCDCQ96CD2 204 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 RAB39BQ96DA2 213 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 FAM120BQ96EK7 910 aaKnown RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 OTUB1Q96FW1 271 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 EGLN2Q96KS0 407 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CCT8L2Q96SF2 557 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 SDF2Q99470 211 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CCDC106Q9BWC9 280 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 C1QTNF5Q9BXJ0 243 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 RSPO3Q9BXY4 272 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ACTRT3Q9BYD9 372 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 NMUR2Q9GZQ4 415 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 TPK1Q9H3S4 243 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF385DQ9H6B1 395 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 REEP4Q9H6H4 257 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 GRPEL1Q9HAV7 217 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 RRAGDQ9NQL2 400 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 CTPS2Q9NRF8 586 aa4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF275Q9NSD4 429 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-229ENST00000554672 ZCCHC3Q9NUD5 404 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms