RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CPSF4O95639 269 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 OPN1LWP04000 364 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CHRM4P08173 479 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 GUSBP08236 651 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 OR12D1P0DN82 309 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 UBL4AP11441 157 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 FCGR2AP12318 317 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 HPGDP15428 266 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 KLK2P20151 261 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 RPS4Y1P22090 263 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 UQCRC2P22695 453 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 LOXP28300 417 aaPredicted RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 S100A3P33764 101 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CPOXP36551 454 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 PGM1P36871 562 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 EIF1P41567 113 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 MRPL19P49406 292 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 KHKP50053 298 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF41P51814 821 aaPredicted RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 IST1P53990 364 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CLNS1AP54105 237 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CASP9P55211 416 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 FOXG1P55316 489 aaPredicted RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 RPS3AP61247 264 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 EEF1A1P68104 462 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 FAM27E3Q08E93 113 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 SKP2Q13309 424 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 FGFBP1Q14512 234 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 QPRTQ15274 297 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 MAPK11Q15759 364 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 MAPK14Q16539 360 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF239Q16600 458 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ARHGAP11BQ3KRB8 267 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 FAM174BQ3ZCQ3 159 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 GTDC1Q4AE62 458 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 SLC9B1Q4ZJI4 515 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 TTMPQ5BVD1 217 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 PDZK1Q5T2W1 519 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 AGBL2Q5U5Z8 902 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ANXA8L1Q5VT79 327 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 EEF1A1P5Q5VTE0 462 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 AP1ARQ63HQ0 302 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ATG16L1Q676U5 607 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 TYW3Q6IPR3 259 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 BHLHB9Q6PI77 547 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 PAMR1Q6UXH9 720 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 SPNS3Q6ZMD2 512 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 FRRS1Q6ZNA5 592 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CHMP1BQ7LBR1 199 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 SPATA19Q7Z5L4 167 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 RNF130Q86XS8 419 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CDC20BQ86Y33 519 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF619Q8N2I2 560 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF614Q8N883 585 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 RNF152Q8N8N0 203 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CNEP1R1Q8N9A8 125 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF527Q8NB42 609 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 OR6K3Q8NGY3 331 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 OR5W2Q8NH69 310 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 GPR119Q8TDV5 335 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 RNF128Q8TEB7 428 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ZFP90Q8TF47 636 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ABHD3Q8WU67 409 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 OIT3Q8WWZ8 545 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 RAB8BQ92930 207 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ROPN1LQ96C74 230 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CHMP6Q96FZ7 201 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 MARK4Q96L34 752 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CCDC115Q96NT0 180 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 DACH2Q96NX9 599 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 OR52B2Q96RD2 323 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 SLC35A5Q9BS91 424 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 POLDIP3Q9BY77 421 aaKnown RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 LAT2Q9GZY6 243 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 HOXD1Q9GZZ0 328 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CXXC4Q9H2H0 198 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 LIME1Q9H400 295 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 PLEKHF2Q9H8W4 249 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 PAQR5Q9NXK6 330 aaPredicted RBP3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CLEC4AQ9UMR7 237 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 PROCRQ9UNN8 238 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 CARD8Q9Y2G2 431 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 PLEKHA6Q9Y2H5 1048 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 ACANP16112 2415 aa3.68□□□□□ -1.82
VTI1B-203ENST00000554636 USF3Q68DE3 2245 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 GOLGA8QA0A0J9YX86 632 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 GOLGA8OA6NCC3 632 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 DUXAA6NLW8 204 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 CLDN24A6NM45 220 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 TRPC5OSA6NMA1 111 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 DEFB108AA8MXU0 73 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 GOLGA8NF8WBI6 632 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 SLCO1B7G3V0H7 640 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 H3BNH8 94 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 HMGN4O00479 90 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 STX11O75558 287 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 SYNGR4O95473 234 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 AGR2O95994 175 aa3.67□□□□□ -1.82
VTI1B-203ENST00000554636 UBTFL6P0CB48 400 aaPredicted RBP3.67□□□□□ -1.82
VTI1B-203ENST00000554636 POU2F1P14859 743 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms