RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 RNF13O43567 381 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 SEC14L2O76054 403 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 OR5F1O95221 314 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 LYPD3O95274 346 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 CD40P25942 277 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 CAPZA2P47755 286 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 PTH2RP49190 550 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 SH3BGRP55822 239 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-213ENST00000554600 ATP5J2P56134 94 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 RPS4XP62701 263 aaKnown RBP9.34□□□□□ -0.91
SHMT2-213ENST00000554600 SELENOWP63302 87 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 ARF1P84077 181 aaKnown RBP9.34□□□□□ -0.91
SHMT2-213ENST00000554600 SLC25A3Q00325 362 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 SPOCK1Q08629 439 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 CAMK2DQ13557 499 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 ZNF74Q16587 644 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 CEACAM16Q2WEN9 425 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 SHEQ5VZ18 495 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 LINC00114Q6XXX2 140 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 HACD2Q6Y1H2 254 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 FKBP9P1Q75LS8 142 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 LINGO2Q7L985 606 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 NKAIN4Q8IVV8 208 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 WDR31Q8NA23 367 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 OR6N1Q8NGY5 312 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 LILRB1Q8NHL6 650 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-213ENST00000554600 TXNDC15Q96J42 360 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 OR2M2Q96R28 347 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 KCNS3Q9BQ31 491 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 LINC00470Q9BZP3 86 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 AMBRA1Q9C0C7 1298 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 FKRPQ9H9S5 495 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 CRLF2Q9HC73 371 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 GPR35Q9HC97 309 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 FAIMQ9NVQ4 179 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 ADA2Q9NZK5 511 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 ATP23Q9Y6H3 246 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 CSPG4Q6UVK1 2322 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 CR1P17927 2039 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 LOC102725191A0A1B0GVB3 256 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 SHISA9B4DS77 424 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 BLOC1S5-TXNDC5H3BN57 136 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 FZD7O75084 574 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 GMNNO75496 209 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 ZNF432O94892 652 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 IFNW1P05000 195 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 IFNGR1P15260 489 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 NCK1P16333 377 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 PRDX6P30041 224 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 YAP1P46937 504 aaKnown RBP9.33□□□□□ -0.92
SHMT2-213ENST00000554600 CSNK1A1P48729 337 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 UGT2B15P54855 530 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 BIDP55957 195 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 ANKRD16Q6P6B7 361 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 SLC35D2Q76EJ3 337 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 YTHDF3Q7Z739 585 aaKnown RBP9.33□□□□□ -0.92
SHMT2-213ENST00000554600 PXKQ7Z7A4 578 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 VTCN1Q7Z7D3 282 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 TMEM123Q8N131 208 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 LRRC75A-AS1Q8N1F1 130 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 LRRC17Q8N6Y2 441 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 ANKK1Q8NFD2 765 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 PFN4Q8NHR9 129 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 TMEM255BQ8WV15 326 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 TMEM239Q8WW34 195 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 BCL2L2Q92843 193 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-213ENST00000554600 SGTBQ96EQ0 304 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 Q96MF0 132 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 PRSS27Q9BQR3 290 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 TMUB1Q9BVT8 246 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 SLC19A3Q9BZV2 496 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 POLR2J2Q9GZM3 115 aaKnown RBP9.33□□□□□ -0.92
SHMT2-213ENST00000554600 POLR2J3Q9H1A7 115 aaKnown RBP9.33□□□□□ -0.92
SHMT2-213ENST00000554600 OBP2BQ9NPH6 170 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 ZNF229Q9UJW7 825 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 POFUT2Q9Y2G5 429 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 ARL2BPQ9Y2Y0 163 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 MED31Q9Y3C7 131 aa9.33□□□□□ -0.92
SHMT2-213ENST00000554600 MCIDASD6RGH6 385 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 ATP6V1G2-DDX39BF2Z307 99 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 DCTN3O75935 186 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 SERPINA1P01009 418 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 MT-ND1P03886 318 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 SOD3P08294 240 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 FUT1P19526 365 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 CDKN1AP38936 164 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 RBM34P42696 430 aaKnown RBP9.32□□□□□ -0.92
SHMT2-213ENST00000554600 FABP6P51161 128 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 MXRA7P84157 204 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 ST3GAL3Q11203 375 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 MELKQ14680 651 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 IFI44LQ53G44 452 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 PHYHD1Q5SRE7 291 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 AGAP6Q5VW22 663 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 C20orf196Q8IYI0 205 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 FBXL14Q8N1E6 418 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 RNF148Q8N7C7 305 aa9.32□□□□□ -0.92
SHMT2-213ENST00000554600 GEMIN6Q8WXD5 167 aaKnown RBP9.32□□□□□ -0.92
SHMT2-213ENST00000554600 ZNF837Q96EG3 531 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms