RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 LTB4RQ15722 352 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 CARTPTQ16568 116 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 DECR1Q16698 335 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 TEX35Q5T0J7 233 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 SLC2A7Q6PXP3 512 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 USP43Q70EL4 1123 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 SAMD14Q8IZD0 417 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 CADM3Q8N126 398 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 SLC43A2Q8N370 569 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 METTL4Q8N3J2 472 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 C17orf53Q8N3J3 647 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 L3MBTL4Q8NA19 623 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 FAM110BQ8TC76 370 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 RNF128Q8TEB7 428 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 ABHD3Q8WU67 409 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 EXT2Q93063 718 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 RPL36ALQ969Q0 106 aaKnown RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 CPNE4Q96A23 557 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 MTBPQ96DY7 904 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 CNRIP1Q96F85 164 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 NAP1L3Q99457 506 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 RBM4Q9BWF3 364 aaKnown RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 FAIM2Q9BWQ8 316 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 TBL1XR1Q9BZK7 514 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 RTN4RQ9BZR6 473 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 ALG9Q9H6U8 611 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 FKRPQ9H9S5 495 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 NMRAL1Q9HBL8 299 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 MYNNQ9NPC7 610 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 PNRC2Q9NPJ4 139 aaKnown RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 NPAP1Q9NZP6 1156 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 MSRB1Q9NZV6 116 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 CHMP2BQ9UQN3 213 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 VDAC3Q9Y277 283 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 PPP2R2CQ9Y2T4 447 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 RNF11Q9Y3C5 154 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 TEX264Q9Y6I9 313 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 V9GYY5 206 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 ALPK2Q86TB3 2170 aa4.21□□□□□ -1.73
ATXN3-228ENST00000554592 MGAM2Q2M2H8 2515 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 A0A1W2PRB8 838 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 GJE1A6NN92 205 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 SYCE1LA8MT33 242 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 SUPT3HB4E1H0 165 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 UBXN8O00124 270 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 HSPB6O14558 160 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 KERAO60938 352 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 SUPT3HO75486 399 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 SEC14L2O76054 403 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ANGPTL1O95841 491 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 SCGB1D1O95968 90 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 SPARCP09486 303 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 TNFSF8P32971 234 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 MPIP34949 423 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 EIF1P41567 113 aaKnown RBP4.21□□□□□ -1.74
ATXN3-228ENST00000554592 FNTAP49354 379 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 CENPAP49450 140 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ZNF83P51522 516 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 DVL1P1P54792 670 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-228ENST00000554592 RAB10P61026 200 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 GTF2H2Q13888 395 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ZKSCAN8Q15776 578 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ZNF239Q16600 458 aaKnown RBP4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ZSWIM7Q19AV6 140 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 FAM205BPQ63HN1 556 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 FRG2Q64ET8 278 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 TTC19Q6DKK2 380 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-228ENST00000554592 CDC73Q6P1J9 531 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 GTF2H2CQ6P1K8 395 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 METTL2BQ6P1Q9 378 aaKnown RBP4.21□□□□□ -1.74
ATXN3-228ENST00000554592 APOOLQ6UXV4 268 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 FCRLAQ7L513 359 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 SLC46A3Q7Z3Q1 461 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 SERPINA11Q86U17 422 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 DPP10Q8N608 796 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 LRRC17Q8N6Y2 441 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 CEP112Q8N8E3 955 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 OR9A2Q8NGT5 310 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ATP6V1E2Q96A05 226 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 NXNL1Q96CM4 212 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 FBXO17Q96EF6 278 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 RNF145Q96MT1 663 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ZNF48Q96MX3 618 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ATOH8Q96SQ7 321 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 TRMOQ9BU70 441 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 MRPL1Q9BYD6 325 aaKnown RBP4.21□□□□□ -1.74
ATXN3-228ENST00000554592 BPESC1Q9GZL8 116 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 TMEM185BQ9H7F4 350 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 METTL17Q9H7H0 456 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ANKRA2Q9H9E1 313 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 CAB39LQ9H9S4 337 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 SCPEP1Q9HB40 452 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 C3orf14Q9HBI5 128 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 PFDN4Q9NQP4 134 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 GIMAP4Q9NUV9 329 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 MED17Q9NVC6 651 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 NMRK1Q9NWW6 199 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 FLRT3Q9NZU0 649 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 ARMCX1Q9P291 453 aa4.21□□□□□ -1.74
ATXN3-228ENST00000554592 KLHL9Q9P2J3 617 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms