RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CACNG8Q8WXS5 425 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 KIFAP3Q92845 792 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 GLT1D1Q96MS3 346 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 ZNF317Q96PQ6 595 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 MAPKAP1Q9BPZ7 522 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 TMEM246Q9BRR3 403 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 TMEM121Q9BTD3 319 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 HINT2Q9BX68 163 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 HDHD2Q9H0R4 259 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 IKZF5Q9H5V7 419 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 UGT1A10Q9HAW8 530 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 LY9Q9HBG7 655 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 ZNF302Q9NR11 478 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 VNN3Q9NY84 501 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 IL20Q9NYY1 176 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 BFARQ9NZS9 450 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 ADAM22Q9P0K1 906 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 GALPQ9UBC7 116 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 CLN8Q9UBY8 286 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 GGA2Q9UJY4 613 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 NUP50Q9UKX7 468 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 CELA1Q9UNI1 258 aa3.67□□□□□ -1.82
SCFD1-211ENST00000554437 AK6Q9Y3D8 172 aaKnown RBP3.67□□□□□ -1.82
SCFD1-211ENST00000554437 KCNE1BA0A087WTH5 132 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 RGS16O15492 202 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 PPIHO43447 177 aaKnown RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 PSTPIP1O43586 416 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 CALUO43852 315 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 ATP5LO75964 103 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 SMC2O95347 1197 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 SLC2A10O95528 541 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 AP2A1O95782 977 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 DUX4L4P0CJ87 422 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 CT45A10P0DMU9 189 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 BCKDHAP12694 445 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 ZBTB25P24278 435 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 IGFBP5P24593 272 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 ATP5A1P25705 553 aaKnown RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 CD82P27701 267 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 SLC1A2P43004 574 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 OR1D4P47884 311 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 POU3F4P49335 361 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 SLC26A2P50443 739 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 VAMP3Q15836 100 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 XKR4Q5GH76 650 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 SASS6Q6UVJ0 657 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 LRRC31Q6UY01 552 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 FRA10AC1Q70Z53 315 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 NIPA1Q7RTP0 329 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 SLC16A14Q7RTX9 510 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 MRPL21Q7Z2W9 205 aaKnown RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 LRRC8AQ8IWT6 810 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 CMTM8Q8IZV2 173 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 ZNF565Q8N9K5 539 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 FBXO36Q8NEA4 188 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 B3GNT7Q8NFL0 401 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 OR4F6Q8NGB9 312 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 FAM110BQ8TC76 370 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 AENQ8WTP8 325 aaKnown RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 PIH1D2Q8WWB5 315 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 UBE2E3Q969T4 207 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 MRGPRFQ96AM1 343 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 PLEKHA8Q96JA3 519 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 CLCC1Q96S66 551 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 CNN2Q99439 309 aaKnown RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 UQCC2Q9BRT2 126 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 HCAR1Q9BXC0 346 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 NSRP1Q9H0G5 558 aaKnown RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 NANSQ9NR45 359 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 MYEF2Q9P2K5 600 aaKnown RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 DPM3Q9P2X0 92 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 SLC22A14Q9Y267 594 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 ZNF256Q9Y2P7 627 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-211ENST00000554437 CBY1Q9Y3M2 126 aa3.66□□□□□ -1.82
SCFD1-211ENST00000554437 SBNO1A3KN83 1393 aa3.65□□□□□ -1.82
SCFD1-211ENST00000554437 TRBV7-9A0A0J9YWB2 115 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 TMEM120BA0PK00 339 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 OR6C65A6NJZ3 312 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 E7ENQ6 273 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 TM9SF1O15321 606 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 AIREO43918 545 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 HUS1O60921 280 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 SCELO95171 688 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 MMP1P03956 469 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 ANXA5P08758 320 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 CT62P0C5K7 136 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 NQO2P16083 231 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF43P17038 809 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 AZU1P20160 251 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 IL2RGP31785 369 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 IFNA8P32881 189 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 CRATP43155 626 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 XCR1P46094 333 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 QARSP47897 775 aaKnown RBP3.65□□□□□ -1.83
SCFD1-211ENST00000554437 KCNJ3P48549 501 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 MYL6P60660 151 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 SKP1P63208 163 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 RIPPLY1Q0D2K3 151 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 CYTH1Q15438 398 aa3.65□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF77Q15935 545 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms