RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 TMEM43Q9BTV4 400 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 CAPS2Q9BXY5 557 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 TDRD3Q9H7E2 651 aaKnown RBP3.6□□□□□ -1.83
CHD8-207ENST00000554384 MARCH5Q9NX47 278 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 STAP1Q9ULZ2 295 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 UGT2A1Q9Y4X1 527 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 SH3TC1Q8TE82 1336 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 MYO3BQ8WXR4 1341 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 UBR2Q8IWV8 1755 aa3.6□□□□□ -1.83
CHD8-207ENST00000554384 ZNF292O60281 2723 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 CHD7Q9P2D1 2997 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 TRAV26-1A0A087WT03 109 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 MBTPS2O43462 519 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 ECI2O75521 394 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 ATP5LO75964 103 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 STAMBPO95630 424 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 LGI1O95970 557 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 LALBAP00709 142 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 IGHG4P01861 327 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 NPR2P20594 1047 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 HTR1FP30939 366 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 TAGLN2P37802 199 aaKnown RBP3.59□□□□□ -1.83
CHD8-207ENST00000554384 BTDP43251 543 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 RGRP47804 291 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 CHRNB3Q05901 458 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 FGL1Q08830 312 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 BCL7AQ4VC05 210 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 ARCQ7LC44 396 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 DHDDSQ86SQ9 333 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 ERI1Q8IV48 349 aaKnown RBP3.59□□□□□ -1.83
CHD8-207ENST00000554384 ZNF679Q8IYX0 411 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 MFSD9Q8NBP5 474 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 FBXO30Q8TB52 745 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 DCUN1D4Q92564 292 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 PHYHIPLQ96FC7 376 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 ZIM3Q96PE6 472 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 TUBGCP2Q9BSJ2 902 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 SMYD3Q9H7B4 428 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 CD274Q9NZQ7 290 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 IFT52Q9Y366 437 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 SLCO1B1Q9Y6L6 691 aa3.59□□□□□ -1.83
CHD8-207ENST00000554384 MAST4O15021 2626 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 RAI1Q7Z5J4 1906 aaPredicted RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 A0A0J9YXY3 114 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 FOXE1O00358 373 aaPredicted RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 DCTN6O00399 190 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 GRIA1P42261 906 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 MAGEA8P43361 318 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 QARSP47897 775 aaKnown RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 GNB2P62879 340 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 CSNK1G2P78368 415 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 TGFBR3Q03167 851 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 ZNF630Q2M218 657 aaPredicted RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 CARD16Q5EG05 197 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 BEND3Q5T5X7 828 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 WDR74Q6RFH5 385 aaPredicted RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 IL34Q6ZMJ4 242 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 VRK2Q86Y07 508 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 CCDC65Q8IXS2 484 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 ZNF100Q8IYN0 542 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 EIF1ADQ8N9N8 165 aaKnown RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 ZNF740Q8NDX6 193 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 OR4K14Q8NGD5 310 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 C7orf33Q8WU49 177 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 SCFD1Q8WVM8 642 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 MAIP1Q8WWC4 291 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 COQ2Q96H96 371 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 RBM14Q96PK6 669 aaKnown RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 MTMR9Q96QG7 549 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 RNF2Q99496 336 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 UBE2ZQ9H832 354 aaPredicted RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 TREM2Q9NZC2 230 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 CDH9Q9ULB4 789 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 PRPF19Q9UMS4 504 aaKnown RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 ZNF256Q9Y2P7 627 aaPredicted RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 LTBP2Q14767 1821 aa3.58□□□□□ -1.84
CHD8-207ENST00000554384 MAP1BP46821 2468 aaKnown RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 RIF1Q5UIP0 2472 aaKnown RBP3.58□□□□□ -1.84
CHD8-207ENST00000554384 LRRC37AA6NMS7 1700 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 KLLNB2CW77 178 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 GFYI3L273 518 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 GAKO14976 1311 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 LGALS2P05162 132 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 CAPN1P07384 714 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 CCDC130P13994 396 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 FUT3P21217 361 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 ANXA13P27216 316 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 GNA11P29992 359 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 YWHABP31946 246 aaKnown RBP3.57□□□□□ -1.84
CHD8-207ENST00000554384 MAP3K8P41279 467 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 GSSP48637 474 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 EFNB2P52799 333 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 ATP1B3P54709 279 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 APOC4P55056 127 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 LYZP61626 148 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 KLRB1Q12918 225 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 EXOC3L2Q2M3D2 409 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 SFT2D3Q587I9 215 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 KDELC1Q6UW63 502 aa3.57□□□□□ -1.84
CHD8-207ENST00000554384 TMEM110Q86TL2 294 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms