RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CD3EP07766 207 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 ITGA5P08648 1049 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 HOXB6P17509 224 aaKnown RBP11.5□□□□□ -0.57
SHMT2-211ENST00000554310 CRYBA2P53672 197 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 CDH12P55289 794 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 TGFBR3Q03167 851 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 NPTX1Q15818 432 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 NCMAPQ5T1S8 102 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 TSPO2Q5TGU0 170 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 ALKBH2Q6NS38 261 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 CREB3L2Q70SY1 520 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 MICU2Q8IYU8 434 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 ZIC4Q8N9L1 334 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 SCAIQ8N9R8 606 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF417Q8TAU3 575 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 PROX1Q92786 737 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 TAAR8Q969N4 342 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 CENPNQ96H22 339 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF385AQ96PM9 386 aaKnown RBP11.5□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF587Q96SQ5 575 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-211ENST00000554310 AMBRA1Q9C0C7 1298 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 SLC7A10Q9NS82 523 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 SCOCQ9UIL1 159 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 BAG5Q9UL15 447 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 RCE1Q9Y256 329 aa11.5□□□□□ -0.57
SHMT2-211ENST00000554310 ELOVL7A1L3X0 281 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 A6NHS1 94 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 CPSF4LA6NMK7 179 aaKnown RBP11.49□□□□□ -0.57
SHMT2-211ENST00000554310 HS3ST1O14792 307 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 GSTA4O15217 222 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 AKAP8O43823 692 aaKnown RBP11.49□□□□□ -0.57
SHMT2-211ENST00000554310 TMCC2O75069 709 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 LYNP07948 512 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF43P17038 809 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 MPGP29372 298 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 GRPRP30550 384 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 BSPH1Q075Z2 132 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 ATP6AP1Q15904 470 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 GABRA6Q16445 453 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 ENTPD8Q5MY95 495 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 ADAM5Q6NVV9 412 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 FKBP9P1Q75LS8 142 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 AMIGO2Q86SJ2 522 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 EPHX4Q8IUS5 362 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 VANGL1Q8TAA9 524 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-211ENST00000554310 ADAMTS16Q8TE57 1224 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 SLC41A3Q96GZ6 507 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 MPP4Q96JB8 637 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 MUS81Q96NY9 551 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 OXGR1Q96P68 337 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 C9orf16Q9BUW7 83 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 SEMA6AQ9H2E6 1030 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 YY1AP1Q9H869 796 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 B3GAT1Q9P2W7 334 aa11.49□□□□□ -0.57
SHMT2-211ENST00000554310 LOC102725191A0A1B0GVB3 256 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 TRAPPC13A5PLN9 417 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF587BE7ETH6 402 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 CXCR6O00574 342 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 CLOCKO15516 846 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 SMPD2O60906 423 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 KRT33AO76009 404 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 MT-ATP6P00846 226 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 RAP2AP10114 183 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 HOXC12P31275 282 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 SELENOPP49908 381 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 FAM98BQ52LJ0 330 aaKnown RBP11.48□□□□□ -0.57
SHMT2-211ENST00000554310 NIPAL3Q6P499 406 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 TMEM154Q6P9G4 183 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 LINC00114Q6XXX2 140 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 H1FNTQ75WM6 255 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-211ENST00000554310 TGIF2LYQ8IUE0 185 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 P3H2Q8IVL5 708 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 LRRC75A-AS1Q8N1F1 130 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 ZNF611Q8N823 705 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 OR4D11Q8NGI4 311 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 ALKBH3Q96Q83 286 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-211ENST00000554310 ASPNQ9BXN1 380 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 SLC19A3Q9BZV2 496 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 POLR2J2Q9GZM3 115 aaKnown RBP11.48□□□□□ -0.57
SHMT2-211ENST00000554310 POLR2J3Q9H1A7 115 aaKnown RBP11.48□□□□□ -0.57
SHMT2-211ENST00000554310 NPAP1Q9NZP6 1156 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 SEC14L4Q9UDX3 406 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 AMDHD2Q9Y303 409 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 MAGED1Q9Y5V3 778 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-211ENST00000554310 SLC25A15Q9Y619 301 aa11.48□□□□□ -0.57
SHMT2-211ENST00000554310 SETD2Q9BYW2 2564 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-211ENST00000554310 TRAF3IP2O43734 574 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-211ENST00000554310 PLAUP00749 431 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 BGLAPP02818 100 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 FOXG1P55316 489 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-211ENST00000554310 CLDN17P56750 224 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 CHRNB3Q05901 458 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 C1DQ13901 141 aaKnown RBP11.47□□□□□ -0.57
SHMT2-211ENST00000554310 LRRC23Q53EV4 343 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-211ENST00000554310 C9orf135Q5VTT2 229 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 KLHL17Q6TDP4 642 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 KLHL24Q6TFL4 600 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 UGT2A3Q6UWM9 527 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 TMEM108Q6UXF1 575 aa11.47□□□□□ -0.57
SHMT2-211ENST00000554310 ZBTB49Q6ZSB9 765 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms