RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ABCG2Q9UNQ0 655 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 MOKQ9UQ07 419 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CFL2Q9Y281 166 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 CARD8Q9Y2G2 431 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 ANGPTL3Q9Y5C1 460 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 SACSQ9NZJ4 4579 aa2.7□□□□□ -1.98
SLIRP-202ENST00000553981 PLCE1Q9P212 2302 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 IGKV3D-15A0A087WSY6 115 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 GOLGA6L10A0A0M3HER8 536 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 A0A1W2PQD3 144 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 GOLGA6L10A6NI86 522 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 G3V2L1 256 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 RGS14O43566 566 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 TCF21O43680 179 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 KIAA0513O60268 411 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 FCMRO60667 390 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 BCAS2O75934 225 aaPredicted RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 PLGP00747 810 aaPredicted RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 IGKV3-20P01619 116 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 S100BP04271 92 aaPredicted RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF23P17027 643 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ADRA2CP18825 462 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 IL32P24001 234 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 CRABP2P29373 138 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 EFNA4P52798 201 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 PLTPP55058 493 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 CDH15P55291 814 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 RPS16P62249 146 aaKnown RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 H3F3AP84243 136 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 RASGEF1BQ0VAM2 473 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 HSPB3Q12988 150 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 RAB35Q15286 201 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 MAPK11Q15759 364 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ADIPOQQ15848 244 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 NRF1Q16656 503 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 RFTN2Q52LD8 501 aaPredicted RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 HIKESHIQ53FT3 197 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 SPRNQ5BIV9 151 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ELFN2Q5R3F8 820 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 PHYHD1Q5SRE7 291 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 GFI1BQ5VTD9 330 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 AGAP6Q5VW22 663 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 TTC19Q6DKK2 380 aaPredicted RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 SLC22A25Q6T423 547 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 CLEC2AQ6UVW9 174 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 LRIG3Q6UXM1 1119 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 C12orf54Q6X4T0 127 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 RINLQ6ZS11 566 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 TBC1D1Q86TI0 1168 aaPredicted RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 LRP11Q86VZ4 500 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 TDRPQ86YL5 185 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 WDR75Q8IWA0 830 aaKnown RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 UEVLDQ8IX04 471 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 CDK20Q8IZL9 346 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 C17orf53Q8N3J3 647 aaPredicted RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 RFLNBQ8N5W9 214 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 GBP7Q8N8V2 638 aaPredicted RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 C7orf57Q8NEG2 295 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 OR5D16Q8NGK9 328 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ZFP90Q8TF47 636 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 CDS1Q92903 461 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ATP6V1E2Q96A05 226 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 FAM120BQ96EK7 910 aaKnown RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF385AQ96PM9 386 aaKnown RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 DOK1Q99704 481 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ERP44Q9BS26 406 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 INPP5KQ9BT40 448 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 HDHD5Q9BXW7 423 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 FUT8Q9BYC5 575 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 TBL1XR1Q9BZK7 514 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 SHCBP1LQ9BZQ2 653 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 OR11A1Q9GZK7 315 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 RACGAP1Q9H0H5 632 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ELOVL6Q9H5J4 265 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 METTL17Q9H7H0 456 aaPredicted RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 PFDN4Q9NQP4 134 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 G6PC2Q9NQR9 355 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 SLC17A5Q9NRA2 495 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 CTPS2Q9NRF8 586 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 GLRX2Q9NS18 164 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 NSMCE4AQ9NXX6 385 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 TAS2R9Q9NYW1 312 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 TAS2R7Q9NYW3 318 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 SEC14L4Q9UDX3 406 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 MCTS1Q9ULC4 181 aaKnown RBP2.69□□□□□ -1.98
SLIRP-202ENST00000553981 KCNS2Q9ULS6 477 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 OR10H1Q9Y4A9 318 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 PCDHGB1Q9Y5G3 927 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF780BQ9Y6R6 833 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 STAB1Q9NY15 2570 aa2.69□□□□□ -1.98
SLIRP-202ENST00000553981 DNAH3Q8TD57 4116 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 MAP1AP78559 2803 aaPredicted RBP2.68□□□□□ -1.98
SLIRP-202ENST00000553981 LOC105371242A0A075B767 164 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 A0A087WYN8 130 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 A0A087WZY1 265 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 A0A1W2PPM1 405 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 TMEM72A0PK05 275 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 SERINC4A6NH21 518 aa2.68□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF724A8MTY0 619 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms