RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 CDK5Q00535 292 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHD8-204ENST00000553622 ZP4Q12836 540 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 KRR1Q13601 381 aaKnown RBP8.71□□□□□ -1.02
CHD8-204ENST00000553622 SF3B4Q15427 424 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHD8-204ENST00000553622 ACKR1Q16570 336 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 C12orf73Q69YU5 71 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 RPTNQ6XPR3 784 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 C3P1Q6ZMU1 363 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 PTCHD4Q6ZW05 846 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 C8orf59Q8N0T1 100 aaPredicted RBP8.71□□□□□ -1.02
CHD8-204ENST00000553622 DEPDC4Q8N2C3 294 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 LNX2Q8N448 690 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 TCEANCQ8N8B7 351 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 SETD9Q8NE22 299 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 OR52E2Q8NGJ4 325 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 OR4K13Q8NH42 304 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 FAM57AQ8TBR7 257 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 ZPLD1Q8TCW7 415 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 TFAP2CQ92754 450 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 TXNDC15Q96J42 360 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 HRASLS5Q96KN8 279 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 MUS81Q96NY9 551 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 TSPAN32Q96QS1 320 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 PITX2Q99697 317 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 EMC6Q9BV81 110 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 TXNIPQ9H3M7 391 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 RERGLQ9H628 205 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 CALHM2Q9HA72 323 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 RASSF1Q9NS23 344 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 EMC3Q9P0I2 261 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 KLHL9Q9P2J3 617 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 B3GAT1Q9P2W7 334 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 ZNF346Q9UL40 294 aaKnown RBP8.71□□□□□ -1.02
CHD8-204ENST00000553622 GPR52Q9Y2T5 361 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 NBEAQ8NFP9 2946 aa8.71□□□□□ -1.02
CHD8-204ENST00000553622 H7C1C5 153 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 SLC16A6O15403 523 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 TLX2O43763 284 aaPredicted RBP8.7□□□□□ -1.02
CHD8-204ENST00000553622 AKAP8O43823 692 aaKnown RBP8.7□□□□□ -1.02
CHD8-204ENST00000553622 PRKYO43930 277 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 SLC19A2O60779 497 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 WDR1O75083 606 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 VAMP5O95183 116 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 SLC2A10O95528 541 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 TSPAN19P0C672 248 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 GABRA1P14867 456 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 HIST1H1CP16403 213 aaKnown RBP8.7□□□□□ -1.02
CHD8-204ENST00000553622 ACVR2AP27037 513 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 SDHAP31040 664 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 PCYT1AP49585 367 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 CASP6P55212 293 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 PER3P56645 1201 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 CLRN1P58418 232 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 LCN6P62502 163 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 IL18R1Q13478 541 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 CAMK2DQ13557 499 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 KEAP1Q14145 624 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 SLC17A1Q14916 467 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 RNPS1Q15287 305 aaKnown RBP8.7□□□□□ -1.02
CHD8-204ENST00000553622 ACSF3Q4G176 576 aaPredicted RBP8.7□□□□□ -1.02
CHD8-204ENST00000553622 C1orf185Q5T7R7 199 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 ZNF691Q5VV52 312 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 GPR139Q6DWJ6 353 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 GTF2IRD2BQ6EKJ0 949 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 ABLIM2Q6H8Q1 611 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 KRT80Q6KB66 452 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 NIPAL3Q6P499 406 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 LEG1Q6P5S2 330 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 CREB3L2Q70SY1 520 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 GTF2IRD2Q86UP8 949 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 CHERPQ8IWX8 916 aaKnown RBP8.7□□□□□ -1.02
CHD8-204ENST00000553622 CYB561A3Q8NBI2 242 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 SDR9C7Q8NEX9 313 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 RNF128Q8TEB7 428 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 ASB10Q8WXI3 467 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 UBE2FQ969M7 185 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 GPX7Q96SL4 187 aaPredicted RBP8.7□□□□□ -1.02
CHD8-204ENST00000553622 SF3B5Q9BWJ5 86 aaKnown RBP8.7□□□□□ -1.02
CHD8-204ENST00000553622 FN3KQ9H479 309 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 NRIP3Q9NQ35 241 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 CLCF1Q9UBD9 225 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 AASSQ9UDR5 926 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 KLHL21Q9UJP4 597 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 NDRG4Q9ULP0 352 aaKnown RBP8.7□□□□□ -1.02
CHD8-204ENST00000553622 ZNF175Q9Y473 711 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 NBASA2RRP1 2371 aa8.7□□□□□ -1.02
CHD8-204ENST00000553622 DIDO1Q9BTC0 2240 aaKnown RBP8.69□□□□□ -1.02
CHD8-204ENST00000553622 TRGV8A0A0C4DH27 118 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 SLC35F4A4IF30 521 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 A6NIZ1 184 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 FAM183AA6NL82 134 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 ZNF716A6NP11 495 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 SURF4O15260 269 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 TRAF3IP2O43734 574 aaPredicted RBP8.69□□□□□ -1.02
CHD8-204ENST00000553622 IDH3BO43837 385 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 FZD7O75084 574 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 RENP00797 406 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 IGHMP01871 453 aa8.69□□□□□ -1.02
CHD8-204ENST00000553622 PAICSP22234 425 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms