RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 NXF3Q9H4D5 531 aaKnown RBP3.13□□□□□ -1.91
TDP1-207ENST00000553617 WDR55Q9H6Y2 383 aaPredicted RBP3.13□□□□□ -1.91
TDP1-207ENST00000553617 ELL3Q9HB65 397 aaPredicted RBP3.13□□□□□ -1.91
TDP1-207ENST00000553617 MYOZ2Q9NPC6 264 aa3.13□□□□□ -1.91
TDP1-207ENST00000553617 ABCB10Q9NRK6 738 aa3.13□□□□□ -1.91
TDP1-207ENST00000553617 C19orf12Q9NSK7 152 aa3.13□□□□□ -1.91
TDP1-207ENST00000553617 IMP3Q9NV31 184 aaKnown RBP3.13□□□□□ -1.91
TDP1-207ENST00000553617 ABCD2Q9UBJ2 740 aa3.13□□□□□ -1.91
TDP1-207ENST00000553617 LCMT1Q9UIC8 334 aa3.13□□□□□ -1.91
TDP1-207ENST00000553617 ZNF639Q9UID6 485 aa3.13□□□□□ -1.91
TDP1-207ENST00000553617 MGAT4AQ9UM21 535 aa3.13□□□□□ -1.91
TDP1-207ENST00000553617 AK9Q5TCS8 1911 aa3.13□□□□□ -1.91
TDP1-207ENST00000553617 CPDO75976 1380 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 IGHV3-16A0A0C4DH30 117 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 TEX48A0A1B0GUV7 120 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 C11orf98E9PRG8 122 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 DLGAP1O14490 977 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 RS1O15537 224 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 STX10O60499 249 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 PGK1P00558 417 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 F10P00742 488 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 RPS17P08708 135 aaKnown RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 KRT16P08779 473 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ETS2P15036 469 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 NCK1P16333 377 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ZNF7P17097 686 aaPredicted RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 SYT1P21579 422 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 CMA1P23946 247 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 PPP2R1BP30154 601 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 EPHX2P34913 555 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 SPRP35270 261 aaPredicted RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 GCKP35557 465 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 HPCAL1P37235 193 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 CD79BP40259 229 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 SLC26A3P40879 764 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ALDH3B2P48448 385 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 TGM4P49221 684 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 RIDAP52758 137 aaKnown RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 PLK1P53350 603 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 OR2B6P58173 313 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 HILS1P60008 231 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 CXCR4P61073 352 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ATP6V0D1P61421 351 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 BST2Q10589 180 aaKnown RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 DPYSL3Q14195 570 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 MESDQ14696 234 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 GANABQ14697 944 aaKnown RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 PPP1R3AQ16821 1122 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 EXOC3L4Q17RC7 722 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ZCWPW2Q504Y3 356 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 C5orf47Q569G3 176 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 C6orf226Q5I0X4 101 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 MS4A13Q5J8X5 152 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 DCST2Q5T1A1 773 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 FAM182AQ5T1J6 154 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 PVRIGQ6DKI7 326 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 OR2A2Q6IF42 318 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ACSM5Q6NUN0 579 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 C3orf33Q6P1S2 294 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 GCNT7Q6ZNI0 430 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 LRRTM1Q86UE6 522 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 SERPINA9Q86WD7 417 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 RNF130Q86XS8 419 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 GID4Q8IVV7 300 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 FBXO36Q8NEA4 188 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 BEST4Q8NFU0 473 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 OR4D5Q8NGN0 318 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 OR6Q1Q8NGQ2 317 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 OR1L4Q8NGR5 311 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 OR1F12Q8NHA8 337 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 TBCKQ8TEA7 893 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 PYDC1Q8WXC3 89 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 TADA1Q96BN2 335 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ECHDC3Q96DC8 303 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 CPB2Q96IY4 423 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 CEP170P1Q96L14 293 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 SLC6A7Q99884 636 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ATF6BQ99941 703 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 DUSP16Q9BY84 665 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 SRRQ9GZT4 340 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 SLC38A1Q9H2H9 487 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 RNF41Q9H4P4 317 aaPredicted RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 NARFLQ9H6Q4 476 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 MCCC2Q9HCC0 563 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 OR2S2Q9NQN1 319 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 DIABLOQ9NR28 239 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ABCC13Q9NSE7 274 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 SAMSN1Q9NSI8 373 aaKnown RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 EXD2Q9NVH0 621 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 CD274Q9NZQ7 290 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 CTSZQ9UBR2 303 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 CYB5R1Q9UHQ9 305 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 PHF11Q9UIL8 331 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ZNF221Q9UK13 617 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 ERGIC3Q9Y282 383 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 PRG3Q9Y2Y8 225 aaPredicted RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 HYOU1Q9Y4L1 999 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 CSDC2Q9Y534 153 aaKnown RBP3.12□□□□□ -1.91
TDP1-207ENST00000553617 CPQQ9Y646 472 aa3.12□□□□□ -1.91
TDP1-207ENST00000553617 AUP1Q9Y679 476 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms