RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 DDIT4LQ96D03 193 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 MSI2Q96DH6 328 aaKnown RBP10.33□□□□□ -0.76
CKAP4-202ENST00000552828 DNAJA3Q96EY1 480 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 C19orf24Q9BVV8 132 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 SF3B5Q9BWJ5 86 aaKnown RBP10.33□□□□□ -0.76
CKAP4-202ENST00000552828 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 RSPO3Q9BXY4 272 aaPredicted RBP10.33□□□□□ -0.76
CKAP4-202ENST00000552828 SPAG4Q9NPE6 437 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 OBP2BQ9NPH6 170 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 RPS6KB2Q9UBS0 482 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 USP22Q9UPT9 525 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 TMED7Q9Y3B3 224 aa10.33□□□□□ -0.76
CKAP4-202ENST00000552828 YLPM1P49750 1951 aaKnown RBP10.32□□□□□ -0.76
CKAP4-202ENST00000552828 LOC100289279A0A1B0GTE1 492 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 LOC390937A0A1W2PQ73 354 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 TMEM72A0PK05 275 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 SLC35F4A4IF30 521 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 NME4O00746 187 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 GSTA4O15217 222 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 LGI1O95970 557 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 WNT11O96014 354 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 PAX7P23759 505 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 NCALDP61601 193 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 HOXC5Q00444 222 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 C9orf135Q5VTT2 229 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 RANBP3LQ86VV4 465 aaPredicted RBP10.32□□□□□ -0.76
CKAP4-202ENST00000552828 POMGNT2Q8NAT1 580 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 OR9K2Q8NGE7 335 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 FBXO17Q96EF6 278 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 NSL1Q96IY1 281 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 SORCS2Q96PQ0 1159 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 PIMREGQ9BSJ6 248 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 TMEM27Q9HBJ8 222 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 MYOZ1Q9NP98 299 aaPredicted RBP10.32□□□□□ -0.76
CKAP4-202ENST00000552828 NDE1Q9NXR1 346 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 ADA2Q9NZK5 511 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 ABCD2Q9UBJ2 740 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 KCNS2Q9ULS6 477 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 MOKQ9UQ07 419 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 FKBP7Q9Y680 259 aa10.32□□□□□ -0.76
CKAP4-202ENST00000552828 IGHV1-18A0A0C4DH31 117 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 IGHV4-61A0A0C4DH41 118 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 ZC3H12DA2A288 527 aaKnown RBP10.31□□□□□ -0.76
CKAP4-202ENST00000552828 LIPT2A6NK58 231 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 CD247P20963 164 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 KDELR2P33947 212 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 SERPINF1P36955 418 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 GSK3BP49841 420 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 MXRA7P84157 204 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 C3orf36Q3SXR2 165 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 HIKESHIQ53FT3 197 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 C16orf89Q6UX73 402 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 COMTD1Q86VU5 262 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 PGAM4Q8N0Y7 254 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 LSMEM1Q8N8F7 131 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 ZNF540Q8NDQ6 660 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 GPR32P1Q8NGA4 272 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 DNAJA4Q8WW22 397 aaPredicted RBP10.31□□□□□ -0.76
CKAP4-202ENST00000552828 C3orf49Q96BT1 292 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 FOXN4Q96NZ1 517 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 ARHGDIGQ99819 225 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 KCTD14Q9BQ13 255 aaPredicted RBP10.31□□□□□ -0.76
CKAP4-202ENST00000552828 KATNB1Q9BVA0 655 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 SELENONQ9NZV5 590 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 CRNNQ9UBG3 495 aaPredicted RBP10.31□□□□□ -0.76
CKAP4-202ENST00000552828 TESQ9UGI8 421 aaKnown RBP10.31□□□□□ -0.76
CKAP4-202ENST00000552828 BAG5Q9UL15 447 aa10.31□□□□□ -0.76
CKAP4-202ENST00000552828 AQP7P3A6NL99 342 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 A8MVM7 634 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 B2RBV5 119 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 B9A039 149 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 ANKRD65E5RJM6 399 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 M0R3H8 397 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 CXCR6O00574 342 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 FMO6PO60774 539 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 PDE5AO76074 875 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 GPIP06744 558 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 PNMTP11086 282 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 APEHP13798 732 aaKnown RBP10.3□□□□□ -0.76
CKAP4-202ENST00000552828 ZNF23P17027 643 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 HTR2AP28223 471 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 P2RY4P51582 365 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 CRYBA2P53672 197 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 SNRPD2P62316 118 aaKnown RBP10.3□□□□□ -0.76
CKAP4-202ENST00000552828 GGTLC2Q14390 218 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 OR1Q1Q15612 314 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 EFNB3Q15768 340 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 LRRC23Q53EV4 343 aaPredicted RBP10.3□□□□□ -0.76
CKAP4-202ENST00000552828 CYBRD1Q53TN4 286 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 OTUD3Q5T2D3 398 aaPredicted RBP10.3□□□□□ -0.76
CKAP4-202ENST00000552828 ULK3Q6PHR2 472 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 KLHL24Q6TFL4 600 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 AAED1Q7RTV5 226 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 ABHD12BQ7Z5M8 362 aaPredicted RBP10.3□□□□□ -0.76
CKAP4-202ENST00000552828 TMEM99Q8N816 258 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 FAM169BQ8N8A8 192 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 LZICQ8WZA0 190 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 ZNF385AQ96PM9 386 aaKnown RBP10.3□□□□□ -0.76
CKAP4-202ENST00000552828 SLC38A2Q96QD8 506 aa10.3□□□□□ -0.76
CKAP4-202ENST00000552828 MCHR1Q99705 422 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms