RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 GAS1P54826 345 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 OC90Q02509 493 aaPredicted RBP5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 BNIP2Q12982 314 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 FGFBP1Q14512 234 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 OR1C1Q15619 314 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 GPR68Q15743 365 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 ZSWIM7Q19AV6 140 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 GRAMD1BQ3KR37 738 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 KLHL26Q53HC5 615 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 SLC30A6Q6NXT4 461 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 ZNF782Q6ZMW2 699 aaPredicted RBP5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 PATL1Q86TB9 770 aaKnown RBP5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 GLCCI1Q86VQ1 547 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 IFNEQ86WN2 208 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 KRT73Q86Y46 540 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 MISPQ8IVT2 679 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 PEX5LQ8IYB4 626 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 RNF148Q8N7C7 305 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 POGLUT1Q8NBL1 392 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 RELL2Q8NC24 303 aaPredicted RBP5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 OR10G3Q8NGC4 313 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 LINC01560Q8TB33 94 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 DDB2Q92466 427 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 PIGTQ969N2 578 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 ASB9Q96DX5 294 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 ZMYND19Q96E35 227 aaPredicted RBP5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 NODALQ96S42 347 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 ZNF607Q96SK3 696 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 ANGPTL4Q9BY76 406 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 TP63Q9H3D4 680 aaPredicted RBP5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 MUC13Q9H3R2 512 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 GORASP2Q9H8Y8 452 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 KLHL1Q9NR64 748 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 USP22Q9UPT9 525 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 ANGPT4Q9Y264 503 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 IFT52Q9Y366 437 aa5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.75□□□□□ -1.49
DEPDC4-210ENST00000551642 NCKAP5O14513 1909 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 CADP27708 2225 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 DNAH9Q9NYC9 4486 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 IGLV3-32A0A0A0MS00 114 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 CXCR6O00574 342 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 ACOT8O14734 319 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 RRP9O43818 475 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 NME2P1O60361 137 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 TRIM3O75382 744 aaPredicted RBP5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 GMNNO75496 209 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 SERPINB7O75635 380 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 SLC25A12O75746 678 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 MFN2O95140 757 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 SNX4O95219 450 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 IFNA14P01570 189 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 P04436 131 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 SP1P08047 785 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 PABPC4LP0CB38 370 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 CCL3P10147 92 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 HPGDP15428 266 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 CNR1P21554 472 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 PRKAR1BP31321 381 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 KDELR2P33947 212 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 LIPAP38571 399 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 PTGDSP41222 190 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 KCNJ5P48544 419 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 CRYBA2P53672 197 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 EEF1A1P68104 462 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 C17orf67Q0P5P2 114 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 TRAP1Q12931 704 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 LARS2Q15031 903 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 MAPK14Q16539 360 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 SRSF7Q16629 238 aaKnown RBP eCLIP5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 MTX3Q5HYI7 312 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 C6orf52Q5T4I8 152 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 RNF220Q5VTB9 566 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 GLYATQ6IB77 296 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 RTL6Q6ICC9 239 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 SPINK14Q6IE38 97 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 APOOLQ6UXV4 268 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 OLIG3Q7RTU3 272 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 MDGA2Q7Z553 956 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 GALNT10Q86SR1 603 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 ARMC8Q8IUR7 673 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 GRAMD2AQ8IUY3 354 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 ARIH2OSQ8N7S6 290 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 TMEM178AQ8NBL3 297 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 FAM156AQ8NDB6 213 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 FAM71CQ8NEG0 241 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 OR52P1PQ8NH57 321 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 WDR60Q8WVS4 1066 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 RASSF5Q8WWW0 418 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 IGFBPL1Q8WX77 278 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 POP5Q969H6 163 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 SLC35B4Q969S0 331 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 MCUR1Q96AQ8 359 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 TMEM41AQ96HV5 264 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 RNF145Q96MT1 663 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 TTYH2Q9BSA4 534 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 OSBPL11Q9BXB4 747 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 PINK1Q9BXM7 581 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 TBL1XR1Q9BZK7 514 aa5.74□□□□□ -1.49
DEPDC4-210ENST00000551642 METTL7AQ9H8H3 244 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms