RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 C9orf135Q5VTT2 229 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 HMBOX1Q6NT76 420 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 KLHL24Q6TFL4 600 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 HIST3H2AQ7L7L0 130 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 LINGO2Q7L985 606 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 ARHGAP24Q8N264 748 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 GPR137CQ8N3F9 429 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 FAM156AQ8NDB6 213 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 RBM15BQ8NDT2 890 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 OR52N5Q8NH56 324 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 HIST1H2ACQ93077 130 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 LRR1Q96L50 414 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 ADAD1Q96M93 576 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 NSMCE2Q96MF7 247 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 FOXC2Q99958 501 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 C20orf141Q9NUB4 165 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 MED29Q9NX70 200 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 TAS2R5Q9NYW4 299 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 NPAP1Q9NZP6 1156 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 PRR14LQ5THK1 2151 aa13.52□□□□□ -0.24
PRPF40B-211ENST00000551063 SLC35F4A4IF30 521 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 ZNF726A6NNF4 738 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 B2RBV5 119 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 J3KTA2 159 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 ARPC2O15144 300 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 SERPINI2O75830 405 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 FUT1P19526 365 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 PAX7P23759 505 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 BSPH1Q075Z2 132 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 LGALS3BPQ08380 585 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 ACKR1Q16570 336 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 ADAM5Q6NVV9 412 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 KLHL17Q6TDP4 642 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 C20orf196Q8IYI0 205 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 LRRC17Q8N6Y2 441 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 WDR31Q8NA23 367 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 OR1K1Q8NGR3 316 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 MAGEE2Q8TD90 523 aaPredicted RBP13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 BCAS4Q8TDM0 211 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 ACOT11Q8WXI4 607 aaPredicted RBP13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 ALPK1Q96QP1 1244 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 UBTD1Q9HAC8 227 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 B3GAT2Q9NPZ5 323 aa13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 CCM2LQ9NUG4 571 aaPredicted RBP13.52□□□□□ -0.25
PRPF40B-211ENST00000551063 ROS1P08922 2347 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 DPRXA6NFQ7 191 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 C11orf98E9PRG8 122 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 RNF13O43567 381 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 WNT11O96014 354 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 TSPAN19P0C672 248 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 HOXB1P14653 301 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 IFNGR1P15260 489 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 RHCEP18577 417 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 CD53P19397 219 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 PTAFRP25105 342 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 PRPS1P60891 318 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 RPL18Q07020 188 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 TBRG1Q3YBR2 411 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 ANKRD16Q6P6B7 361 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 TMEM108Q6UXF1 575 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 SLC35D2Q76EJ3 337 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 TSEN54Q7Z6J9 526 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 RNF113BQ8IZP6 322 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 OR6X1Q8NH79 312 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 PYURFQ96I23 114 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 TXNDC15Q96J42 360 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 RADILQ96JH8 1075 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 EMC6Q9BV81 110 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 CXXC4Q9H2H0 198 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 GPR35Q9HC97 309 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 MOV10Q9HCE1 1003 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 BEX4Q9NWD9 120 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 NDUFAF4Q9P032 175 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 RHCGQ9UBD6 479 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 MGAT4BQ9UQ53 548 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 FAM32AQ9Y421 112 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 CELSR1Q9NYQ6 3014 aa13.51□□□□□ -0.25
PRPF40B-211ENST00000551063 ARPC4-TTLL3A0A0A6YYG9 625 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 A0A1W2PRQ8 180 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 NPIPB13A6NJU9 1138 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 NPIPB4C9JG80 1138 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 HS3ST1O14792 307 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 CLOCKO15516 846 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 PIP5K1CO60331 668 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 TMCC2O75069 709 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 PLAUP00749 431 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 SEMG1P04279 462 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 H1F0P07305 194 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 T-ENOLP0DO92 83 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 IFI30P13284 250 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 CD99P14209 185 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 ITGA2P17301 1181 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 CDH2P19022 906 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 CSNK1A1P48729 337 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 BIDP55957 195 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 PRKCDQ05655 676 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 DGCR6Q14129 220 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 CEACAM16Q2WEN9 425 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 DEFB113Q30KQ7 82 aa13.5□□□□□ -0.25
PRPF40B-211ENST00000551063 ANKDD1AQ495B1 522 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms