RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SLC46A3Q7Z3Q1 461 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 ABHD12BQ7Z5M8 362 aaPredicted RBP11.33□□□□□ -0.6
NPAS3-209ENST00000551008 C20orf196Q8IYI0 205 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 LRRC17Q8N6Y2 441 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 ANKK1Q8NFD2 765 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 OR8J3Q8NGG0 315 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 TRMT61AQ96FX7 289 aaKnown RBP11.33□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF75AQ96N20 296 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 SLC38A2Q96QD8 506 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 CRLF2Q9HC73 371 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 MEPEQ9NQ76 525 aaPredicted RBP11.33□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF224Q9NZL3 707 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 POU2F3Q9UKI9 436 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 CORINQ9Y5Q5 1042 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 ATP23Q9Y6H3 246 aa11.33□□□□□ -0.6
NPAS3-209ENST00000551008 IGHV4-30-2A0A087WSY4 118 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 SLC35F4A4IF30 521 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 TRAPPC13A5PLN9 417 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 H7C417 338 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 SHOX2O60902 331 aaPredicted RBP11.32□□□□□ -0.6
NPAS3-209ENST00000551008 SLC43A1O75387 559 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 KRT33AO76009 404 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 WNT11O96014 354 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 FABP6P51161 128 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 SH3BGRP55822 239 aaPredicted RBP11.32□□□□□ -0.6
NPAS3-209ENST00000551008 NAAAQ02083 359 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 HGFACQ04756 655 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 PUDPQ08623 228 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 C1DQ13901 141 aaKnown RBP11.32□□□□□ -0.6
NPAS3-209ENST00000551008 MFSD13AQ14CX5 517 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 ETFDHQ16134 617 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 SWI5Q1ZZU3 235 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 HMBOX1Q6NT76 420 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 KLHL24Q6TFL4 600 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 CARM1Q86X55 608 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 SLC30A8Q8IWU4 369 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 UEVLDQ8IX04 471 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 POU5F2Q8N7G0 328 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 RNF217Q8TC41 542 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 EPYCQ99645 322 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 REG4Q9BYZ8 158 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 ALG2Q9H553 416 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 B3GNT2Q9NY97 397 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 TAS2R5Q9NYW4 299 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 ARMCX1Q9P291 453 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 SLC13A4Q9UKG4 626 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 SLC7A7Q9UM01 511 aa11.32□□□□□ -0.6
NPAS3-209ENST00000551008 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPAS3-209ENST00000551008 LOC100653049A0A140TA62 436 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 BBIP1A8MTZ0 92 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 INAFM1C9JVW0 142 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 M0R3G1 203 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 KRT34O76011 436 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 LY6HO94772 140 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 VIMP08670 466 aaKnown RBP11.31□□□□□ -0.6
NPAS3-209ENST00000551008 IGFBP1P08833 259 aaPredicted RBP11.31□□□□□ -0.6
NPAS3-209ENST00000551008 ASAH2BP0C7U1 165 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 NQO1P15559 274 aaKnown RBP11.31□□□□□ -0.6
NPAS3-209ENST00000551008 UGT2B15P54855 530 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 PMS2P3Q13401 168 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 CYLC2Q14093 348 aaPredicted RBP11.31□□□□□ -0.6
NPAS3-209ENST00000551008 MSMPQ1L6U9 139 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 C3orf36Q3SXR2 165 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 INTS11Q5TA45 600 aaKnown RBP11.31□□□□□ -0.6
NPAS3-209ENST00000551008 CARD17Q5XLA6 110 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF627Q7L945 461 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 MDP1Q86V88 176 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 PRIMA1Q86XR5 153 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 TREML1Q86YW5 311 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 NKAIN4Q8IVV8 208 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 FBXL14Q8N1E6 418 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 GPR137CQ8N3F9 429 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 FAM169BQ8N8A8 192 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 PIK3C3Q8NEB9 887 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 OR10H5Q8NGA6 315 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 OR5J2Q8NH18 312 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 NANOS1Q8WY41 292 aaKnown RBP11.31□□□□□ -0.6
NPAS3-209ENST00000551008 RCN3Q96D15 328 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 KATNB1Q9BVA0 655 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 ASPNQ9BXN1 380 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 FKRPQ9H9S5 495 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 FAIMQ9NVQ4 179 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 CMTM6Q9NX76 183 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 NOX1Q9Y5S8 564 aa11.31□□□□□ -0.6
NPAS3-209ENST00000551008 FAM171A2A8MVW0 826 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF99A8MXY4 864 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-209ENST00000551008 FAM220BPB1ANY3 271 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 C11orf98E9PRG8 122 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 KPNA4O00629 521 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-209ENST00000551008 SSX4O60224 188 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 CH25HO95992 272 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 MT-ATP6P00846 226 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 NPPAP01160 153 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 IFNGR1P15260 489 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 CBR1P16152 277 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 PCSK6P29122 969 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-209ENST00000551008 MDH1P40925 334 aaKnown RBP11.3□□□□□ -0.6
NPAS3-209ENST00000551008 IDH3GP51553 393 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-209ENST00000551008 UBE2NP61088 152 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms