RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 NDUFAF1Q9Y375 327 aa11.66□□□□□ -0.54
GCN1-206ENST00000549815 CORINQ9Y5Q5 1042 aa11.66□□□□□ -0.54
GCN1-206ENST00000549815 A8MV72 311 aaPredicted RBP11.65□□□□□ -0.54
GCN1-206ENST00000549815 ZNF99A8MXY4 864 aaPredicted RBP11.65□□□□□ -0.54
GCN1-206ENST00000549815 B9A039 149 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 M0QX08 132 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 M0R3H8 397 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 AKAP8O43823 692 aaKnown RBP11.65□□□□□ -0.54
GCN1-206ENST00000549815 FMO6PO60774 539 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 EDF1O60869 148 aaKnown RBP11.65□□□□□ -0.54
GCN1-206ENST00000549815 THY1P04216 161 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 C8BP07358 591 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 CSF3P09919 207 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 SERPINF1P36955 418 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 GZMMP51124 257 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 MTPNP58546 118 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 NCALDP61601 193 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 WDR88Q6ZMY6 472 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 ZNF627Q7L945 461 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 TSPYL5Q86VY4 417 aaPredicted RBP11.65□□□□□ -0.54
GCN1-206ENST00000549815 UEVLDQ8IX04 471 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 GPR137CQ8N3F9 429 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 C11orf65Q8NCR3 313 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 OR6T1Q8NGN1 323 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 TSPEARQ8WU66 669 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 TXNDC15Q96J42 360 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 LRR1Q96L50 414 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 EPYCQ99645 322 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 EMC6Q9BV81 110 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 PLK3Q9H4B4 646 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 KAT8Q9H7Z6 458 aaKnown RBP11.65□□□□□ -0.54
GCN1-206ENST00000549815 VIPAS39Q9H9C1 493 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 MED29Q9NX70 200 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 B3GNT2Q9NY97 397 aa11.65□□□□□ -0.54
GCN1-206ENST00000549815 MRPL39Q9NYK5 338 aaKnown RBP11.65□□□□□ -0.54
GCN1-206ENST00000549815 RTTNQ86VV8 2226 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 IGHV2OR16-5A0A0B4J2B6 119 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 SLC35F4A4IF30 521 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 M0R3G1 203 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 PLPP3O14495 311 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 SEC14L2O76054 403 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 OPN1SWP03999 348 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 OR4A8P0C604 315 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 CD247P20963 164 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 ARR3P36575 388 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 IDH3GP51553 393 aaPredicted RBP11.64□□□□□ -0.55
GCN1-206ENST00000549815 CRYBA2P53672 197 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 SNRPD2P62316 118 aaKnown RBP11.64□□□□□ -0.55
GCN1-206ENST00000549815 POU3F1Q03052 451 aaPredicted RBP11.64□□□□□ -0.55
GCN1-206ENST00000549815 ZNF613Q6PF04 617 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 CXXC5Q7LFL8 322 aaKnown RBP11.64□□□□□ -0.55
GCN1-206ENST00000549815 RANBP3LQ86VV4 465 aaPredicted RBP11.64□□□□□ -0.55
GCN1-206ENST00000549815 RBM45Q8IUH3 476 aaKnown RBP11.64□□□□□ -0.55
GCN1-206ENST00000549815 OR4F15Q8NGB8 312 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 ZNF75AQ96N20 296 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 MCHR1Q99705 422 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 KCNS3Q9BQ31 491 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 ASPNQ9BXN1 380 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 ZNF442Q9H7R0 627 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 NOX3Q9HBY0 568 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 ZNF224Q9NZL3 707 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 SELENONQ9NZV5 590 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 SLC13A4Q9UKG4 626 aa11.64□□□□□ -0.55
GCN1-206ENST00000549815 MALRD1Q5VYJ5 2156 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 TMEM129A0AVI4 362 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 NDUFS8O00217 210 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 FBP2O00757 339 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 ANGPT2O15123 496 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 CHP2O43745 196 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 IGFBP1P08833 259 aaPredicted RBP11.63□□□□□ -0.55
GCN1-206ENST00000549815 IGHV4-31P0DP07 118 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 NQO1P15559 274 aaKnown RBP11.63□□□□□ -0.55
GCN1-206ENST00000549815 H2AFXP16104 143 aaPredicted RBP11.63□□□□□ -0.55
GCN1-206ENST00000549815 USF1P22415 310 aaPredicted RBP11.63□□□□□ -0.55
GCN1-206ENST00000549815 THBS4P35443 961 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 PPOXP50336 477 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 PDLIM4P50479 330 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 IL1RL1Q01638 556 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 PUDPQ08623 228 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 PMS2P3Q13401 168 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 ENTPD8Q5MY95 495 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 CARD17Q5XLA6 110 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 VHLLQ6RSH7 139 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 HDXQ7Z353 690 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 PXKQ7Z7A4 578 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 MDP1Q86V88 176 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 CCDC36Q8IYA8 594 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 ANKS4BQ8N8V4 417 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 RNF217Q8TC41 542 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 TAMM41Q96BW9 452 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 DOK1Q99704 481 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 SIKE1Q9BRV8 207 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 ZNF426Q9BUY5 554 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 PCDHAC1Q9H158 963 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 NPHS2Q9NP85 383 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 TMEM160Q9NX00 188 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 USP22Q9UPT9 525 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 NOX1Q9Y5S8 564 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 FKBP7Q9Y680 259 aa11.63□□□□□ -0.55
GCN1-206ENST00000549815 CPSF4LA6NMK7 179 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms