RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 UGT1A9O60656 530 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 HCN1O60741 890 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 CABYRO75952 493 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ERLIN2O94905 339 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 YEATS4O95619 227 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 IGHV3-9P01782 118 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 GATA1P15976 413 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF10P21506 573 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 HTR1FP30939 366 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 EPHX2P34913 555 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 NAA10P41227 235 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 XCR1P46094 333 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 EFNA3P52797 238 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 IST1P53990 364 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 PSMD4P55036 377 aaKnown RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 RAD51Q06609 339 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 SLAQ13239 276 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 GRB7Q14451 532 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 NECTIN1Q15223 517 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 SLC1A5Q15758 541 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 OR52E8Q6IFG1 317 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 REEP3Q6NUK4 255 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ULK3Q6PHR2 472 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 Q6ZRP5 223 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 COMTD1Q86VU5 262 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ZFAND4Q86XD8 727 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 CATSPER3Q86XQ3 398 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 TPRX1Q8N7U7 411 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF491Q8N8L2 437 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 PRSS33Q8NF86 280 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 CD300LFQ8TDQ1 290 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ASB9Q96DX5 294 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 SEC22AQ96IW7 307 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 CELF6Q96J87 481 aaKnown RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 JSRP1Q96MG2 331 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 XPO6Q96QU8 1125 aaKnown RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 CYP2S1Q96SQ9 504 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF670Q9BS34 389 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 GAL3ST2Q9H3Q3 398 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF696Q9H7X3 374 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 ADAP2Q9NPF8 381 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 GPATCH2LQ9NWQ4 482 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 PAK1IP1Q9NWT1 392 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 TMEM181Q9P2C4 612 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 MYEF2Q9P2K5 600 aaKnown RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 SAMD4AQ9UPU9 718 aaKnown RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 PLEKHH2Q8IVE3 1493 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 SPTBN5Q9NRC6 3674 aaKnown RBP3.45□□□□□ -1.86
SCAF11-210ENST00000547654 LAMB4A4D0S4 1761 aa3.45□□□□□ -1.86
SCAF11-210ENST00000547654 MEGF6O75095 1541 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 DUOX2Q9NRD8 1548 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 QRICH2Q9H0J4 1663 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 ADGRL2O95490 1459 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 PRXQ9BXM0 1461 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 PLEKHH1Q9ULM0 1364 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 IGHV3OR16-12A0A075B7B8 117 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 OR6C74A6NCV1 312 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 OR5B21A6NL26 309 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 FOXI3A8MTJ6 420 aaPredicted RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 M0R3G1 203 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 SULT2B1O00204 365 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 PPP1R2P9O14990 202 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 RRP8O43159 456 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 ALDOBP05062 364 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 CT62P0C5K7 136 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 BCKDHBP21953 392 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 CCNOP22674 350 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 IGFBP5P24593 272 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 CD82P27701 267 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 SLC1A2P43004 574 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 SLC1A1P43005 524 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 YAP1P46937 504 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 NOVP48745 357 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 CX3CR1P49238 355 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 CCNG1P51959 295 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 KPNA2P52292 529 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 NDUFV3P56181 108 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 TMEM50BP56557 158 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 YWHAEP62258 255 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 ERVK-25P63136 954 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 MRPS22P82650 360 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 XIAPP98170 497 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 SLC10A7Q0GE19 358 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 OR5I1Q13606 314 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 FASTKD3Q14CZ7 662 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 OXA1LQ15070 435 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF146Q15072 292 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 ANGPT1Q15389 498 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 VWA2Q5GFL6 755 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 SAMD4BQ5PRF9 694 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 FAM120AOSQ5T036 256 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 PDPK2PQ6A1A2 396 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 H3F3CQ6NXT2 135 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 ARMCX5Q6P1M9 558 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 TTC23LQ6PF05 361 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 STXBP4Q6ZWJ1 553 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 JAGN1Q8N5M9 183 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 TTC29Q8NA56 475 aaPredicted RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 OR4A15Q8NGL6 344 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 ATP5SQ99766 215 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms