RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 PLGLB1Q02325 96 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 SLC22A6Q4U2R8 563 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 PAPD4Q6PIY7 484 aaKnown RBP14.37□□□□□ -0.11
CUX1-211ENST00000546411 OR5M1Q8NGP8 315 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 HHLA2Q9UM44 414 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 TMED7Q9Y3B3 224 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 MGAMO43451 1857 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 TRABD2BA6NFA1 517 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 OR7A10O76100 309 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 PRH1P02810 166 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 SYPP08247 313 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 C21orf58P58505 322 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 SRYQ05066 204 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 GPR139Q6DWJ6 353 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 METAP1DQ6UB28 335 aaPredicted RBP14.37□□□□□ -0.11
CUX1-211ENST00000546411 KCTD12Q96CX2 325 aaKnown RBP14.37□□□□□ -0.11
CUX1-211ENST00000546411 DDIT4LQ96D03 193 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 OTOFQ9HC10 1997 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 C2CD4DB7Z1M9 353 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 K7EQS6 105 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 BRINP1O60477 761 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 RFPL3O75679 317 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 SCRG1O75711 98 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 EIF4EP06730 217 aaKnown RBP14.37□□□□□ -0.11
CUX1-211ENST00000546411 HSD17B7P56937 341 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 CXADRP78310 365 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 TMEM176BQ3YBM2 270 aaPredicted RBP14.37□□□□□ -0.11
CUX1-211ENST00000546411 OR13C9Q8NGT0 318 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 SLC46A1Q96NT5 459 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 HIST1H2AAQ96QV6 131 aa14.37□□□□□ -0.11
CUX1-211ENST00000546411 CENPVL1A0A0U1RR11 272 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 UBL3O95164 117 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 CBX5P45973 191 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 Q499Y3 187 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 RAB12Q6IQ22 244 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 LRRC69Q6ZNQ3 347 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 EID2Q8N6I1 236 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 OR5D18Q8NGL1 313 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 CACNA1GO43497 2377 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 SPTY2D1-AS1A0A0U1RR47 76 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 PRAMEF25A6NGN4 478 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 DPM1O60762 260 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 PTHLHP12272 177 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 CCINQ13939 588 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 METTL11BQ5VVY1 283 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 C8orf44Q96CB5 159 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 FGF20Q9NP95 211 aaPredicted RBP14.36□□□□□ -0.11
CUX1-211ENST00000546411 RNF215Q9Y6U7 377 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 PHYHO14832 338 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 LAMTOR5O43504 91 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 PSMB1P20618 241 aaKnown RBP14.36□□□□□ -0.11
CUX1-211ENST00000546411 BEX5Q5H9J7 111 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 SPIN3Q5JUX0 258 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 COX15Q7KZN9 410 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 ZAR1Q86SH2 424 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 IQCF2Q8IXL9 164 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 FCRL1Q96LA6 429 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 SEC22CQ9BRL7 303 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 RIF1Q5UIP0 2472 aaKnown RBP14.36□□□□□ -0.11
CUX1-211ENST00000546411 IGKV1-8A0A0C4DH67 115 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 A0A1W2PPC4 97 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 ZNF736B4DX44 427 aaPredicted RBP14.36□□□□□ -0.11
CUX1-211ENST00000546411 E9PI62 339 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 NPIPB8E9PQR5 432 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 SPINT1O43278 529 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 RBM34P42696 430 aaKnown RBP14.36□□□□□ -0.11
CUX1-211ENST00000546411 KIR2DL3P43628 341 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 ACTBP60709 375 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 ACTG1P63261 375 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 MLC1Q15049 377 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 TMEM164Q5U3C3 297 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 OR2L13Q8N349 312 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 ANKRD10Q9NXR5 420 aa14.36□□□□□ -0.11
CUX1-211ENST00000546411 CGGBP1Q9UFW8 167 aaPredicted RBP14.36□□□□□ -0.11
CUX1-211ENST00000546411 AMY2BP19961 511 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 CD27P26842 260 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 FAPQ12884 760 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 ELP2Q6IA86 826 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 ZNF425Q6IV72 752 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 CORO6Q6QEF8 472 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 PLCZ1Q86YW0 608 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 CCDC36Q8IYA8 594 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 LILRB4Q8NHJ6 448 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 ARHGDIGQ99819 225 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 IDSB3KWA1 339 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 ICOSLGO75144 302 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 CRTAPO75718 401 aaPredicted RBP14.35□□□□□ -0.11
CUX1-211ENST00000546411 GLCEO94923 617 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 IL33O95760 270 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 APOC3P02656 99 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 ALKBH1Q13686 389 aaKnown RBP14.35□□□□□ -0.11
CUX1-211ENST00000546411 MANEAQ5SRI9 462 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 SLC2A12Q8TD20 617 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 TAS2R8Q9NYW2 309 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 SIGLEC7Q9Y286 467 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 SIX6O95475 246 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 TMEM225BP0DP42 221 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 RPL18Q07020 188 aaKnown RBP14.35□□□□□ -0.11
CUX1-211ENST00000546411 EFR3AQ14156 821 aa14.35□□□□□ -0.11
CUX1-211ENST00000546411 ZNF587Q96SQ5 575 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms