RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ASB16Q96NS5 453 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 ARPC5LQ9BPX5 153 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 POU2F3Q9UKI9 436 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 A0A1W2PS29 197 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 OR6C76A6NM76 312 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SURF4O15260 269 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 PRKRAO75569 313 aaKnown RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 TNFSF4P23510 183 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SORDQ00796 357 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 OXA1LQ15070 435 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SLC25A43Q8WUT9 341 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 OR14A2Q96R54 314 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM202A6NGA9 273 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 A6NIN4 97 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 SLC16A11Q8NCK7 471 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 TCEAL7Q9BRU2 100 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 C20orf85Q9H1P6 137 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF385DQ9H6B1 395 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 RPS19P39019 145 aaKnown RBP11.55□□□□□ -0.56
COL4A6-209ENST00000545689 LRRC26Q2I0M4 334 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF620Q6ZNG0 422 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 GRINAQ7Z429 371 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 LIN7BQ9HAP6 207 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 A0A087WV62 115 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM221A6NGB7 291 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM200CA6NKL6 621 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 EPHA1P21709 976 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 ACHEP22303 614 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 SQSTM1Q13501 440 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 DUSP19Q8WTR2 217 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 PIGQQ9BRB3 760 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 SAV1Q9H4B6 383 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-209ENST00000545689 CMC2Q9NRP2 79 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 CLEC2DQ9UHP7 191 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 TSPAN11A1L157 253 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 CD27P26842 260 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 RACK1P63244 317 aaKnown RBP11.55□□□□□ -0.56
COL4A6-209ENST00000545689 STEAP1BQ6NZ63 245 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 NPSR1Q6W5P4 371 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 MEX3BQ6ZN04 569 aaKnown RBP11.55□□□□□ -0.56
COL4A6-209ENST00000545689 SLC16A14Q7RTX9 510 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 BOLLQ8N9W6 283 aaKnown RBP11.55□□□□□ -0.56
COL4A6-209ENST00000545689 RAB39BQ96DA2 213 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 MRPL38Q96DV4 380 aaKnown RBP11.55□□□□□ -0.56
COL4A6-209ENST00000545689 YIPF6Q96EC8 236 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 ARL5BQ96KC2 179 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 SGCZQ96LD1 299 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 OR52A5Q9H2C5 316 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 SCPEP1Q9HB40 452 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 STRCQ7RTU9 1775 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 MRPL33O75394 65 aaKnown RBP11.55□□□□□ -0.56
COL4A6-209ENST00000545689 PCSK6P29122 969 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 AFF3P51826 1226 aaKnown RBP11.55□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF133P52736 654 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-209ENST00000545689 ARG2P78540 354 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 SHISA6Q6ZSJ9 500 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 KIAA1958Q8N8K9 716 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 SUMF2Q8NBJ7 301 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 MED18Q9BUE0 208 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM30AQ9NV96 361 aa11.55□□□□□ -0.56
COL4A6-209ENST00000545689 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 PRR35P0CG20 571 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 LUMP51884 338 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 ADPRHP54922 357 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 CLDN17P56750 224 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 CDC20Q12834 499 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 FAPQ12884 760 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 ELAVL1Q15717 326 aaKnown RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 PAPOLGQ9BWT3 736 aaKnown RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 NMNAT2Q9BZQ4 307 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 SLC19A3Q9BZV2 496 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 SEMA4CQ9C0C4 833 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 ECM29Q5VYK3 1845 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 CDC14CA4D256 554 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 A8MXE2 369 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 FOSL2P15408 326 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 CTHP32929 405 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 APOBEC1P41238 236 aaKnown RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 VEGFCP49767 419 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 RBM39Q14498 530 aaKnown RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 DUSP5Q16690 384 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM176BQ3YBM2 270 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 SYS1Q8N2H4 156 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 CELF2-AS1Q8N7Q2 184 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 OR1J2Q8NGS2 313 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 FAM3DQ96BQ1 224 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 TEAD3Q99594 435 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 A0A1B0GX78 115 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 TRABD2BA6NFA1 517 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 SBK2P0C263 348 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 FCGR2AP12318 317 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 CPT2P23786 658 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 HTR5AP47898 357 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 MCCD1P59942 119 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 C1orf140Q5VVS0 124 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 DPY19L4Q7Z388 723 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 TMEFF1Q8IYR6 380 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 OR56B2PQ8NGI1 322 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 PAQR8Q8TEZ7 354 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 SDF2Q99470 211 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms