RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PRKRAO75569 313 aaKnown RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 ATP5HO75947 161 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 RCBTB2O95199 551 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 C6orf47O95873 294 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 AK1P00568 194 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 IGKV3-11P04433 115 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 COX4I1P13073 169 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 ZNF23P17027 643 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 MDKP21741 143 aaPredicted RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 CALB2P22676 271 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 IL12AP29459 219 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 SOX3P41225 446 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 CCT3P49368 545 aaKnown RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 RASSF2P50749 326 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 GPR143P51810 404 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 EEF1A1P68104 462 aaKnown RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 MRPS35P82673 323 aaKnown RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 ID2Q02363 134 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 HSPB3Q12988 150 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 CBX3Q13185 183 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 GNA13Q14344 377 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 TRMT5Q32P41 509 aaKnown RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 SPATS1Q496A3 300 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 C6orf10Q5SRN2 563 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 LRIF1Q5T3J3 769 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 EEF1A1P5Q5VTE0 462 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 ANKRD26P1Q6NSI1 321 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 RTL4Q6ZR62 310 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 NANOGNBQ7Z5D8 188 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 SNX32Q86XE0 403 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 IZUMO1Q8IYV9 350 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 DND1Q8IYX4 353 aaKnown RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 METTL25Q8N6Q8 603 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 C11orf44Q8N8P7 122 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 CDRT4Q8N9R6 151 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 OR4A15Q8NGL6 344 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 OR9I1Q8NGQ6 314 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 OR9A2Q8NGT5 310 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 NUBPLQ8TB37 319 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 SLC2A12Q8TD20 617 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 ADAMTS15Q8TE58 950 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 OIT3Q8WWZ8 545 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 SENP5Q96HI0 755 aaPredicted RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 COL21A1Q96P44 957 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 MS4A4EQ96PG1 132 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 RASL10BQ96S79 203 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 TIMP4Q99727 224 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 HOPXQ9BPY8 73 aaPredicted RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 FAM173AQ9BQD7 235 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 HHATLQ9HCP6 504 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 SLC52A3Q9NQ40 469 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 LIN7CQ9NUP9 197 aaKnown RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 ELOVL5Q9NYP7 299 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 PPP4R1LQ9P1A2 415 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 FAF1Q9UNN5 650 aaPredicted RBP5.88□□□□□ -1.47
LDHA-223ENST00000545215 PRELID1Q9Y255 219 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 SH3GLB1Q9Y371 365 aa5.88□□□□□ -1.47
LDHA-223ENST00000545215 RNF103-CHMP3A0A140T963 221 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 TMEM247A6NEH6 219 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 PGPEP1LA6NFU8 196 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 UPK1AO00322 258 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 MRASO14807 208 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ACOX3O15254 700 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 MGRN1O60291 552 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 PSMG1O95456 288 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 CPSF4O95639 269 aaKnown RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 P04436 131 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ABCB1P08183 1280 aaPredicted RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 CSF1P09603 554 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 NAGAP17050 411 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 CNR1P21554 472 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 S100A1P23297 94 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 LCN1P31025 176 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 CHI3L1P36222 383 aaPredicted RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 PPICP45877 212 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 TMED10P49755 219 aaKnown RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 DVL1P1P54792 670 aaPredicted RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 PSMD4P55036 377 aaKnown RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 SLC37A1P57057 533 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 HBA1P69905 142 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 MRPS22P82650 360 aaKnown RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 FADDQ13158 208 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 RAB35Q15286 201 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 BAK1Q16611 211 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 TBRG1Q3YBR2 411 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 FAM90A2PQ658T7 463 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ZNF474Q6S9Z5 364 aaPredicted RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 OPN5Q6U736 354 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 C17orf107Q6ZR85 190 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 Q6ZRM9 215 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ZNF621Q6ZSS3 439 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ZNF551Q7Z340 670 aaPredicted RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 DHDDSQ86SQ9 333 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 PM20D2Q8IYS1 436 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 TAGAPQ8N103 731 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ARHGAP24Q8N264 748 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ZNF321PQ8N8H1 164 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 OR8J3Q8NGG0 315 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 MUC7Q8TAX7 377 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ZNF721Q8TF20 911 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms