RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 NANOGNBQ7Z5D8 188 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 VTCN1Q7Z7D3 282 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 NKAIN4Q8IVV8 208 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 TMEM123Q8N131 208 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 LRRC75A-AS1Q8N1F1 130 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 LRRC17Q8N6Y2 441 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 ANKS4BQ8N8V4 417 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 KBTBD8Q8NFY9 601 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 TMEM255BQ8WV15 326 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 LRR1Q96L50 414 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 CCT8L2Q96SF2 557 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 EMC6Q9BV81 110 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 CRLF2Q9HC73 371 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 GPR35Q9HC97 309 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 MEPEQ9NQ76 525 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-216ENST00000544996 FAIMQ9NVQ4 179 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 MED29Q9NX70 200 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 NDE1Q9NXR1 346 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 RPS6KA6Q9UK32 745 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 POU2F3Q9UKI9 436 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 AKAP6Q13023 2319 aa13.78□□□□□ -0.2
CCDC78-216ENST00000544996 HTR3EA5X5Y0 456 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 BLOC1S5-TXNDC5H3BN57 136 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 M0R3G1 203 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 HOXB1P14653 301 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-216ENST00000544996 IFNGR1P15260 489 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 NCK1P16333 377 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 MNAT1P51948 309 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 ARF1P84077 181 aaKnown RBP13.77□□□□□ -0.21
CCDC78-216ENST00000544996 ZP4Q12836 540 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 SHEQ5VZ18 495 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 LINGO2Q7L985 606 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 TGIF2LYQ8IUE0 185 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 C20orf196Q8IYI0 205 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 PGAM4Q8N0Y7 254 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 OR6N1Q8NGY5 312 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 LILRB1Q8NHL6 650 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-216ENST00000544996 MAGEE2Q8TD90 523 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-216ENST00000544996 SMAP2Q8WU79 429 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-216ENST00000544996 BCL2L2Q92843 193 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-216ENST00000544996 SGTBQ96EQ0 304 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 TXNDC15Q96J42 360 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 HSH2DQ96JZ2 352 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 ADAD1Q96M93 576 aaKnown RBP13.77□□□□□ -0.21
CCDC78-216ENST00000544996 FNDC11Q9BVV2 318 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 MOV10Q9HCE1 1003 aaKnown RBP13.77□□□□□ -0.21
CCDC78-216ENST00000544996 TAS2R5Q9NYW4 299 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 CISD1Q9NZ45 108 aaKnown RBP13.77□□□□□ -0.21
CCDC78-216ENST00000544996 A4GNTQ9UNA3 340 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 LAMP3Q9UQV4 416 aa13.77□□□□□ -0.21
CCDC78-216ENST00000544996 A0A096LPE4 126 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 A0A1W2PPZ6 126 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 SHISA9B4DS77 424 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 OR7A10O76100 309 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 FUT1P19526 365 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 YAP1P46937 504 aaKnown RBP13.76□□□□□ -0.21
CCDC78-216ENST00000544996 UGT2B15P54855 530 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 CDH11P55287 796 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 BIDP55957 195 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 ADAM8P78325 824 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 MXRA7P84157 204 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 CAMK2DQ13557 499 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 CEACAM16Q2WEN9 425 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 SAMD4BQ5PRF9 694 aaKnown RBP13.76□□□□□ -0.21
CCDC78-216ENST00000544996 GLYATQ6IB77 296 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 C16orf89Q6UX73 402 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 SLC35D2Q76EJ3 337 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 SLC46A3Q7Z3Q1 461 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 CYP4Z1Q86W10 505 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 RNF148Q8N7C7 305 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 PFN4Q8NHR9 129 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 NEUROG1Q92886 237 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 ARL8BQ9NVJ2 186 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 EGFL7Q9UHF1 273 aa13.76□□□□□ -0.21
CCDC78-216ENST00000544996 ARPC4-TTLL3A0A0A6YYG9 625 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 A0A1W2PRG6 482 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 ZNF99A8MXY4 864 aaPredicted RBP13.75□□□□□ -0.21
CCDC78-216ENST00000544996 FAM107AO95990 144 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 BCL10O95999 233 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 CD99P14209 185 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 CSNK1A1P48729 337 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 RPS4XP62701 263 aaKnown RBP13.75□□□□□ -0.21
CCDC78-216ENST00000544996 SLC25A3Q00325 362 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 TRAM2Q15035 370 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 NHLRC1Q6VVB1 395 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 CCDC36Q8IYA8 594 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 OFCC1Q8IZS5 231 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 CCDC197Q8NCU1 140 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 OR6X1Q8NH79 312 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 PERPQ96FX8 193 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 ULBP2Q9BZM5 246 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 C20orf141Q9NUB4 165 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 RHCGQ9UBD6 479 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 SAMD4AQ9UPU9 718 aaKnown RBP13.75□□□□□ -0.21
CCDC78-216ENST00000544996 POFUT2Q9Y2G5 429 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 FAM32AQ9Y421 112 aaKnown RBP13.75□□□□□ -0.21
CCDC78-216ENST00000544996 SNX13Q9Y5W8 968 aa13.75□□□□□ -0.21
CCDC78-216ENST00000544996 DANCRP0C864 163 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 HSD17B1P14061 328 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 TCN1P20061 433 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms