RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 SLC22A5O76082 557 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 IFNGR1P15260 489 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 PSMB10P40306 273 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 SLC37A1P57057 533 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 BTG2P78543 158 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 ELAVL1Q15717 326 aaKnown RBP11.86□□□□□ -0.51
CPSF7-223ENST00000544669 HES5Q5TA89 166 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 TMEM151BQ8IW70 566 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 DND1Q8IYX4 353 aaKnown RBP11.86□□□□□ -0.51
CPSF7-223ENST00000544669 MEIOBQ8N635 442 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 ZNF676Q8N7Q3 588 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 CCDC74AQ96AQ1 378 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 SORCS2Q96PQ0 1159 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 LRRC61Q9BV99 259 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 RBCK1Q9BYM8 510 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 C2orf42Q9NWW7 574 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 TAS2R5Q9NYW4 299 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 STEAP1Q9UHE8 339 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 CLEC4AQ9UMR7 237 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 DTX4Q9Y2E6 619 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 CLDN16Q9Y5I7 305 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 SNRNP200O75643 2136 aaKnown RBP11.86□□□□□ -0.51
CPSF7-223ENST00000544669 A0A1B0GVC2 190 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 TMEM72A0PK05 275 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 UBE2QL1A1L167 161 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 A6NIN4 97 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 TO15178 435 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 XRCC3O43542 346 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 HCRTR1O43613 425 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 CREBL2O60519 120 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-223ENST00000544669 MT-ND4P03905 459 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 NME1P15531 152 aaKnown RBP11.86□□□□□ -0.51
CPSF7-223ENST00000544669 ALOX5APP20292 161 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 M6PRP20645 277 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 MAOAP21397 527 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 IL12BP29460 328 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 GABRA4P48169 554 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 CCR4P51679 360 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 RAP2BP61225 183 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 CAMK2DQ13557 499 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 DNM1P46Q6ZS02 220 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 SYT13Q7L8C5 426 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 MISPQ8IVT2 679 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 RFLNBQ8N5W9 214 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 OR4D9Q8NGE8 314 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 OR6S1Q8NH40 331 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 SMAP2Q8WU79 429 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-223ENST00000544669 LPAR4Q99677 370 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 GPR174Q9BXC1 333 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 SEMA4CQ9C0C4 833 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 NOX3Q9HBY0 568 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 IKZF2Q9UKS7 526 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 CYP8B1Q9UNU6 501 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 RCE1Q9Y256 329 aa11.86□□□□□ -0.51
CPSF7-223ENST00000544669 SCN3AQ9NY46 2000 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 TRBV5-7A0A0A0MS05 114 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 TEX51A0A1B0GUA7 166 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 MEGF11A6BM72 1044 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 EPOPA6NHQ4 379 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 ACOD1A6NK06 481 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 A6NL46 340 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 CHURC1-FNTBB4DL54 471 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 HRKO00198 91 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 AKR7A2O43488 359 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 OR2T1O43869 369 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 CDC123O75794 336 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-223ENST00000544669 WNT1P04628 370 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 GIPP09681 153 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-223ENST00000544669 GP1BBP13224 206 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 TACR3P29371 465 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 FNTBP49356 437 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 CCR6P51684 374 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 PNLIPRP2P54317 469 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 ARPC4P59998 168 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 PPP1CAP62136 330 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 GPLD1P80108 840 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 RPL18Q07020 188 aaKnown RBP11.85□□□□□ -0.51
CPSF7-223ENST00000544669 C1orf61Q13536 156 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 CBFBQ13951 182 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 MFSD13AQ14CX5 517 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 ST3GAL2Q16842 350 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 GLDNQ6ZMI3 551 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-223ENST00000544669 PIAS4Q8N2W9 510 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-223ENST00000544669 UXS1Q8NBZ7 420 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 ZNF680Q8NEM1 530 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 MAP6Q96JE9 813 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 CD93Q9NPY3 652 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 DLL4Q9NR61 685 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 SLCO1C1Q9NYB5 712 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 FRRS1LQ9P0K9 344 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 CKLFQ9UBR5 152 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 COPS7AQ9UBW8 275 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 OR5V1Q9UGF6 321 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 UBQLN2Q9UHD9 624 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 MRM2Q9UI43 246 aaKnown RBP11.85□□□□□ -0.51
CPSF7-223ENST00000544669 MAB21L2Q9Y586 359 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 TICRRQ7Z2Z1 1910 aa11.85□□□□□ -0.51
CPSF7-223ENST00000544669 DOCK9Q9BZ29 2069 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms