RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ANKRD28O15084 1053 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 DHHO43323 396 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 TRIAP1O43715 76 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 RRP9O43818 475 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 XPNPEP2O43895 674 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 EFNA2O43921 213 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PCDH7O60245 1069 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 EIF1BO60739 113 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 RP2O75695 350 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 KCNK2O95069 426 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 NKX2-2O95096 273 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 IGKV1D-16P01601 117 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PRB2P02812 416 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 IL3P08700 152 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 IGFBP1P08833 259 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 MYZAPP0CAP1 466 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CTAGE8P0CG41 777 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PPIAL4GP0DN37 164 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PRPS2P11908 318 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 HSD3B1P14060 373 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CBR1P16152 277 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CDH2P19022 906 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ATP6V1C1P21283 382 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CALCRP30988 508 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 TIA1P31483 386 aaKnown RBP eCLIP3.46□□□□□ -1.863e-6■■■■□ 22.3
SNHG1-220ENST00000544550 ARR3P36575 388 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ELK3P41970 407 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PTDSS1P48651 473 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CLK1P49759 484 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 FOXG1P55316 489 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SH3BGRP55822 239 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SELENOVP59797 346 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 BPIFB3P59826 476 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SLC3A1Q07837 685 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF154Q13106 437 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SNTB2Q13425 540 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 BLMHQ13867 455 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 TRADDQ15628 312 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CD226Q15762 336 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ZKSCAN8Q15776 578 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PFKFB4Q16877 469 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 HFEQ30201 348 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PCGF3Q3KNV8 242 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 TIGD2Q4W5G0 525 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 HIKESHIQ53FT3 197 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SPIN4Q56A73 249 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SYT14P1Q58G82 188 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 TECRLQ5HYJ1 363 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 TSPO2Q5TGU0 170 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CAVIN1Q6NZI2 390 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ZCCHC12Q6PEW1 402 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 FIP1L1Q6UN15 594 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 RAPH1Q70E73 1250 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 GOLGA7Q7Z5G4 137 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CCDC91Q7Z6B0 441 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ISCA2Q86U28 154 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 KRT73Q86Y46 540 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CTAGE4Q8IX94 777 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CCDC36Q8IYA8 594 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 TMEM86BQ8N661 226 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 C1orf52Q8N6N3 182 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 DEFB108BQ8NET1 73 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 OR52E2Q8NGJ4 325 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 OR1K1Q8NGR3 316 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 OR5W2Q8NH69 310 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 RHEBL1Q8TAI7 183 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 GPR119Q8TDV5 335 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SELENOMQ8WWX9 145 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ST8SIA1Q92185 356 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PIK3R3Q92569 461 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SGCDQ92629 289 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 RAB1CQ92928 201 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 RAB8BQ92930 207 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 YIPF5Q969M3 257 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 MAGOHBQ96A72 148 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 TMEM45BQ96B21 275 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ELP4Q96EB1 424 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 GAL3ST1Q99999 423 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 NAA11Q9BSU3 229 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 NOL11Q9H8H0 719 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 CAB39LQ9H9S4 337 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 NOX4Q9NPH5 578 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 HEYLQ9NQ87 328 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SLC7A10Q9NS82 523 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 C1RLQ9NZP8 487 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 VPS29Q9UBQ0 182 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SEC14L4Q9UDX3 406 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PURGQ9UJV8 347 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 NDRG4Q9ULP0 352 aaKnown RBP3.46□□□□□ -1.86
SNHG1-220ENST00000544550 SNX6Q9UNH7 406 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 HDGFL3Q9Y3E1 203 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 NOX1Q9Y5S8 564 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 PSAT1Q9Y617 370 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 NOTCH1P46531 2555 aa3.46□□□□□ -1.86
SNHG1-220ENST00000544550 ROS1P08922 2347 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 NBEAL2Q6ZNJ1 2754 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 A0A096LPK6 155 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 IGHV2OR16-5A0A0B4J2B6 119 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 IGHV1-69-2A0A0G2JMI3 117 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 A0A1W2PPW3 197 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms