RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SLC25A19Q9HC21 320 aa10.6□□□□□ -0.71
DDB1-223ENST00000543658 GP6Q9HCN6 339 aa10.6□□□□□ -0.71
DDB1-223ENST00000543658 FANCFQ9NPI8 374 aa10.6□□□□□ -0.71
DDB1-223ENST00000543658 IMPAD1Q9NX62 359 aa10.6□□□□□ -0.71
DDB1-223ENST00000543658 KLHL21Q9UJP4 597 aa10.6□□□□□ -0.71
DDB1-223ENST00000543658 OSGIN2Q9Y236 505 aa10.6□□□□□ -0.71
DDB1-223ENST00000543658 NOSIPQ9Y314 301 aaKnown RBP10.6□□□□□ -0.71
DDB1-223ENST00000543658 GMPPBQ9Y5P6 360 aa10.6□□□□□ -0.71
DDB1-223ENST00000543658 IER3IP1Q9Y5U9 82 aa10.6□□□□□ -0.71
DDB1-223ENST00000543658 BSNQ9UPA5 3926 aa10.6□□□□□ -0.71
DDB1-223ENST00000543658 TEX13CA0A0J9YWL9 993 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 LOC102725191A0A1B0GVB3 256 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 MBD3L4A6NDZ8 208 aaPredicted RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 MBD3L3A6NE82 208 aaPredicted RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 MBD3L5A6NJ08 208 aaPredicted RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 NPIPB13A6NJU9 1138 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 RIIAD1A6NNX1 92 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 ZNF724A8MTY0 619 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 NPIPB4C9JG80 1138 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 IMPA2O14732 288 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 IDH3BO43837 385 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 RAMP1O60894 148 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 MRPL33O75394 65 aaKnown RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 TGM6O95932 706 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 RENP00797 406 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 IGHMP01871 453 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 TP53P04637 393 aaPredicted RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 HMGN1P05114 100 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 YES1P07947 543 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 IGFBP1P08833 259 aaPredicted RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 TMIGD3P0DMS9 266 aaPredicted RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 HLA-DOBP13765 273 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 APEHP13798 732 aaKnown RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 IFNGR1P15260 489 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 ZNF3P17036 446 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 SDHAP31040 664 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 ACVR1BP36896 505 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 SLC16A1P53985 500 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 BIDP55957 195 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 CLRN1P58418 232 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 FXYD6P3P58550 94 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 KRR1Q13601 381 aaKnown RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 ACKR1Q16570 336 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 EMC4Q5J8M3 183 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 NIPAL3Q6P499 406 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 C3P1Q6ZMU1 363 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 CREB3L2Q70SY1 520 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 AAED1Q7RTV5 226 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 DOLPP1Q86YN1 238 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 TUSC5Q8IXB3 177 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 GCNT2Q8N0V5 402 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 IQCF1Q8N6M8 205 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 CNEP1R1Q8N9A8 125 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 LRRC75AQ8NAA5 344 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 C9orf106Q8NAJ2 232 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 GALNT11Q8NCW6 608 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 SETD9Q8NE22 299 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 OR8D4Q8NGM9 314 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 MBD3L2Q8NHZ7 208 aaPredicted RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 MBOAT4Q96T53 435 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 APOL4Q9BPW4 351 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 ADI1Q9BV57 179 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 RNF122Q9H9V4 155 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 NRIP3Q9NQ35 241 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 PARPBPQ9NWS1 579 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 MED29Q9NX70 200 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 B3GAT1Q9P2W7 334 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 ZNF346Q9UL40 294 aaKnown RBP10.59□□□□□ -0.71
DDB1-223ENST00000543658 CLEC4AQ9UMR7 237 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 ADAM18Q9Y3Q7 739 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 FLVCR1Q9Y5Y0 555 aa10.59□□□□□ -0.71
DDB1-223ENST00000543658 INTS1Q8N201 2190 aaKnown RBP10.58□□□□□ -0.72
DDB1-223ENST00000543658 IGKV3D-15A0A087WSY6 115 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 LOC100130705A0A1B0GUX0 176 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ZNF716A6NP11 495 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ZAR1LA6NP61 321 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 E9PLN8 166 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 M0R3G1 203 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 BHLHE40O14503 412 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ARPC3O15145 178 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 TRAF3IP2O43734 574 aaPredicted RBP10.58□□□□□ -0.72
DDB1-223ENST00000543658 SLC43A1O75387 559 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 KRT33AO76009 404 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 IGHG1P01857 330 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 PAICSP22234 425 aaKnown RBP10.58□□□□□ -0.72
DDB1-223ENST00000543658 TIMP3P35625 211 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 CAPGP40121 348 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 CA7P43166 264 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 GIPRP48546 466 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 SIRPAP78324 504 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 CDK5Q00535 292 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ITGADQ13349 1161 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 MRPL49Q13405 166 aaKnown RBP10.58□□□□□ -0.72
DDB1-223ENST00000543658 FHL1Q13642 323 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 KEAP1Q14145 624 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 SNAPC1Q16533 368 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 SLC35F1Q5T1Q4 408 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 SLX4IPQ5VYV7 408 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 TMEM236Q5W0B7 351 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ADCK1Q86TW2 530 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms