RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 GCAP28676 217 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 EPHA8P29322 1005 aaPredicted RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 AQP2P41181 271 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 GABRA2P47869 451 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ACTBP60709 375 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ACTG1P63261 375 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 TSPAN31Q12999 210 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 GPR50Q13585 617 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 LAIR1Q6GTX8 287 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 GUSBP11Q6P575 273 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ARSKQ6UWY0 536 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 YRDCQ86U90 279 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 MORN4Q8NDC4 146 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 OR2T11Q8NH01 316 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ZFP90Q8TF47 636 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ASB17Q8WXJ9 295 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 TSLPQ969D9 159 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 SYT3Q9BQG1 590 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 PLEKHJ1Q9NW61 149 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 SERGEFQ9UGK8 458 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 B3GNT3Q9Y2A9 372 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 TRAPPC2LH3BP13 241 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 MLF1P58340 268 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 GABARAPL2P60520 117 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ADARB1P78563 741 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 DEFA6Q01524 100 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 CEBPEQ15744 281 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF124Q15973 351 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 PRSS36Q5K4E3 855 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 FRMPD2BQ6IN97 320 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 MEX3BQ6ZN04 569 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ASRGL1Q7L266 308 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 PRSS48Q7RTY5 328 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 FUNDC1Q8IVP5 155 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM151AQ8N4L1 468 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF587Q96SQ5 575 aaPredicted RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 C19orf43Q9BQ61 176 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 DDX31Q9H8H2 851 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 BEX1Q9HBH7 125 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 SLAMF8Q9P0V8 285 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ABCA3Q99758 1704 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 FGF17O60258 216 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 CRYZL1O95825 349 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 OPN1MWP04001 364 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 HEXAP06865 529 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 OPN1MW2P0DN77 364 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 OPN1MW3P0DN78 364 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF182P17025 639 aaPredicted RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 PPIAP62937 165 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 RAB40BQ12829 278 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 MYBPHQ13203 477 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 TRMT12Q53H54 448 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 MOB3CQ70IA8 216 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ADGRG5Q8IZF4 528 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 OR5H2Q8NGV7 314 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF420Q8TAQ5 688 aaPredicted RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 TAMM41Q96BW9 452 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 LGALS12Q96DT0 336 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 SMOC1Q9H4F8 434 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 DNAJC13O75165 2243 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 OR6C76A6NM76 312 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 ST8SIA5O15466 376 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 CD97P48960 835 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 METAP1P53582 386 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 GRK1Q15835 563 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 CNPY1Q3B7I2 92 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 FAM57BQ71RH2 274 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC35D2Q76EJ3 337 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 MRPL41Q8IXM3 137 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 OR5W2Q8NH69 310 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM68Q96MH6 324 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 SGPP1Q9BX95 441 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 MGAT4CQ9UBM8 478 aa6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 C19orf53Q9UNZ5 99 aaPredicted RBP6.36□□□□□ -1.39
SRGAP1-206ENST00000543397 NUP205Q92621 2012 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TRAV18A0A075B6X5 111 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 RAB27BO00194 218 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TNFSF14O43557 240 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 PTBP3O95758 552 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 FABP1P07148 127 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CISD3P0C7P0 127 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 PSMB10P40306 273 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 GIPRP48546 466 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 P2RX1P51575 399 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 MFAP5Q13361 173 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 HNF4GQ14541 408 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 RNFT1Q5M7Z0 435 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 C1orf140Q5VVS0 124 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM205Q6UW68 189 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CMTM1Q8IZ96 169 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 ABHD1Q96SE0 405 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TCEAL2Q9H3H9 227 aaPredicted RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 ELOVL3Q9HB03 270 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 DECR2Q9NUI1 292 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TAS2R8Q9NYW2 309 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 OR14J1Q9UGF5 321 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 CNOT11Q9UKZ1 510 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 PPP1R3CQ9UQK1 317 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 TRBV5-4A0A0C4DH59 114 aa6.35□□□□□ -1.39
SRGAP1-206ENST00000543397 A0A1W2PPC1 479 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms