RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 POMGNT2Q8NAT1 580 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 OR13C2Q8NGS9 318 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 OR51A7Q8NH64 312 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 OR6X1Q8NH79 312 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 FNDC8Q8TC99 324 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 LRR1Q96L50 414 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 TNFRSF13CQ96RJ3 184 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 GPX7Q96SL4 187 aaPredicted RBP10.81□□□□□ -0.68
DDX55-210ENST00000543016 FEVQ99581 238 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 USB1Q9BQ65 265 aaKnown RBP10.81□□□□□ -0.68
DDX55-210ENST00000543016 GABARAPL1Q9H0R8 117 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 TXNIPQ9H3M7 391 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 ELOVL5Q9NYP7 299 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 IL20Q9NYY1 176 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 SEC14L4Q9UDX3 406 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 CLEC4AQ9UMR7 237 aa10.81□□□□□ -0.68
DDX55-210ENST00000543016 FASNP49327 2511 aaKnown RBP10.81□□□□□ -0.68
DDX55-210ENST00000543016 DOPEY1Q5JWR5 2465 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 A6NIZ1 184 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 ANKRD65E5RJM6 399 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 IMPA2O14732 288 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 IDH3BO43837 385 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 AHCYL1O43865 530 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 SLC43A1O75387 559 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 HPRP00739 348 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 IGHMP01871 453 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 CD14P08571 375 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 ZNF23P17027 643 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 SLC6A6P31641 620 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 RPL4P36578 427 aaKnown RBP10.8□□□□□ -0.68
DDX55-210ENST00000543016 IST1P53990 364 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 CLDN17P56750 224 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 RAP1BP61224 184 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 RAP1AP62834 184 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 SIRPAP78324 504 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 PPP1R8Q12972 351 aaKnown RBP10.8□□□□□ -0.68
DDX55-210ENST00000543016 FHL1Q13642 323 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 LAPTM4AQ15012 233 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 P2RY6Q15077 328 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 C1QTNF12Q5T7M4 302 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 FAHD1Q6P587 224 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 VWA1Q6PCB0 445 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 SLC35D2Q76EJ3 337 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 TMEM179BQ7Z7N9 219 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 AMIGO2Q86SJ2 522 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 KDM8Q8N371 416 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 ATG16L2Q8NAA4 619 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 LRRC75AQ8NAA5 344 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 OR9Q2Q8NGE9 314 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 OR52L1Q8NGH7 329 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 ZNF385AQ96PM9 386 aaKnown RBP10.8□□□□□ -0.68
DDX55-210ENST00000543016 GPA33Q99795 319 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 PKP2Q99959 881 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 LINC00470Q9BZP3 86 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 UCK2Q9BZX2 261 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 DCLRE1BQ9H816 532 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 MCCC2Q9HCC0 563 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 C8orf4Q9NR00 106 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 BAIAP2Q9UQB8 552 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 KLF2Q9Y5W3 355 aaPredicted RBP10.8□□□□□ -0.68
DDX55-210ENST00000543016 CDH10Q9Y6N8 788 aa10.8□□□□□ -0.68
DDX55-210ENST00000543016 HELZ2Q9BYK8 2649 aaKnown RBP10.8□□□□□ -0.68
DDX55-210ENST00000543016 KIAA1549Q9HCM3 1950 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 TRAV27A0A087WT01 109 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 MCIDASD6RGH6 385 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 C11orf98E9PRG8 122 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 H0YHG0 523 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 PYCARD-AS1I3L0S3 204 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 ARPC3O15145 178 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 SMNDC1O75940 238 aaKnown RBP eCLIP10.79□□□□□ -0.68
DDX55-210ENST00000543016 ZNF432O94892 652 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 IFNGR1P15260 489 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 RPS6KA3P51812 740 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 CTXN1P60606 82 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 RPL27P61353 136 aaKnown RBP10.79□□□□□ -0.68
DDX55-210ENST00000543016 ELF3P78545 371 aaPredicted RBP10.79□□□□□ -0.68
DDX55-210ENST00000543016 STK11Q15831 433 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 FBXW9Q5XUX1 488 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 HMBOX1Q6NT76 420 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 NIPAL3Q6P499 406 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 CASP12Q6UXS9 341 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 TFAP2EQ6VUC0 442 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 ZNF620Q6ZNG0 422 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 Q6ZT83 130 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 NCCRP1Q6ZVX7 275 aaPredicted RBP10.79□□□□□ -0.68
DDX55-210ENST00000543016 SSX8Q7RTT4 187 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 NUFIP2Q7Z417 695 aaKnown RBP10.79□□□□□ -0.68
DDX55-210ENST00000543016 KIF18BQ86Y91 864 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 LIX1LQ8IVB5 337 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 PARP8Q8N3A8 854 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 RELL2Q8NC24 303 aaPredicted RBP10.79□□□□□ -0.68
DDX55-210ENST00000543016 MOSPD2Q8NHP6 518 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 FANK1Q8TC84 345 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 RNASE6Q93091 150 aaKnown RBP10.79□□□□□ -0.68
DDX55-210ENST00000543016 SLC25A44Q96H78 314 aaPredicted RBP10.79□□□□□ -0.68
DDX55-210ENST00000543016 RBM4BQ9BQ04 359 aaKnown RBP10.79□□□□□ -0.68
DDX55-210ENST00000543016 RBM4Q9BWF3 364 aaKnown RBP10.79□□□□□ -0.68
DDX55-210ENST00000543016 HDHD5Q9BXW7 423 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 SLCO5A1Q9H2Y9 848 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 OR52D1Q9H346 318 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms