RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 PPIHO43447 177 aaKnown RBP15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 HPRP00739 348 aa15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 NAT2P11245 290 aa15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 CD79AP11912 226 aa15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 ETFAP13804 333 aa15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 GTF2E2P29084 291 aaKnown RBP15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 RPL14P50914 215 aaKnown RBP15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 ABCE1P61221 599 aaKnown RBP15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 MRPS11P82912 194 aaKnown RBP15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 C1DQ13901 141 aaKnown RBP15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 OGFOD2Q6N063 350 aa15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 ZNF627Q7L945 461 aa15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 SPATA9Q9BWV2 254 aa15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 TMPRSS13Q9BYE2 586 aa15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 CALML5Q9NZT1 146 aa15.25■□□□□ 0.03
CLSTN3-214ENST00000542663 WDR91A4D1P6 747 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 MS4A18H0YCH9 400 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 AIM2O14862 343 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 TMPRSS2O15393 492 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 SERPINE1P05121 402 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 HLA-DOBP13765 273 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 GRPRP30550 384 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 LIMS1P48059 325 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 CRISP3P54108 245 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 AQP5P55064 265 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 MYBPC1Q00872 1141 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 LARS2Q15031 903 aaKnown RBP15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 TRMT5Q32P41 509 aaKnown RBP15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 MS4A18Q3C1V0 323 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 FAM69AQ5T7M9 428 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 CARD17Q5XLA6 110 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 REP15Q6BDI9 236 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 C6orf89Q6UWU4 347 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 ZNF813Q6ZN06 617 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 C1QL2Q7Z5L3 287 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 C20orf196Q8IYI0 205 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 ZDHHC22Q8N966 263 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 JMJD8Q96S16 334 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 SLC6A7Q99884 636 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 RSPO3Q9BXY4 272 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 ZNF385DQ9H6B1 395 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 MEAF6Q9HAF1 191 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 AIG1Q9NVV5 245 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 PCDHGB1Q9Y5G3 927 aa15.24■□□□□ 0.03
CLSTN3-214ENST00000542663 IGKV1D-42A0A075B6H8 117 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 DEAF1O75398 565 aaPredicted RBP15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 KRT75O95678 551 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 B4GALT1P15291 398 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 ADRA2CP18825 462 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 MAGEB1P43366 347 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 GIPRP48546 466 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 PTDSS1P48651 473 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 MFSD13AQ14CX5 517 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 NHLRC1Q6VVB1 395 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 H1FNTQ75WM6 255 aaPredicted RBP15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 TMEM19Q96HH6 336 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 EMC6Q9BV81 110 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 ZNF416Q9BWM5 594 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 SUCNR1Q9BXA5 334 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 ZNF665Q9H7R5 613 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 HAO1Q9UJM8 370 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 NOX1Q9Y5S8 564 aa15.23■□□□□ 0.03
CLSTN3-214ENST00000542663 A0A0G2JPF8 293 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 HNRNPCL2B2RXH8 293 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 HNRNPCL3B7ZW38 293 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 PLPP2O43688 288 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 AKAP8O43823 692 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 HNRNPCL1O60812 293 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 HNRNPCL4P0DMR1 293 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 CBLP22681 906 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 CRATP43155 626 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 DSTNP60981 165 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 RPS23P62266 143 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 RAB1AP62820 205 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 LRRC74AQ0VAA2 488 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 ALKBH6Q3KRA9 238 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 ZNF311Q5JNZ3 666 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 AVPI1Q5T686 147 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 GKAP1Q5VSY0 366 aaPredicted RBP15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 ACSM5Q6NUN0 579 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 ZNF584Q8IVC4 421 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 LRR1Q96L50 414 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 ZNF696Q9H7X3 374 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 DUSP13Q9UII6 198 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 ZNF232Q9UNY5 417 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 GPR45Q9Y5Y3 372 aa15.22■□□□□ 0.03
CLSTN3-214ENST00000542663 SDHDO14521 159 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 RFXANKO14593 260 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 OR2T1O43869 369 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 CDC14BO60729 498 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 MPZL1O95297 269 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 SLC1A6P48664 564 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 GALK2Q01415 458 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 MVKQ03426 396 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 RAB39AQ14964 217 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 GTDC1Q4AE62 458 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 UEVLDQ8IX04 471 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 TEX29Q8N6K0 151 aa15.21■□□□□ 0.03
CLSTN3-214ENST00000542663 ADPRHL1Q8NDY3 354 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms