RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MCIDASD6RGH6 385 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 MITFO75030 526 aaPredicted RBP20.55■□□□□ 0.88
HOMER3-205ENST00000542541 BCL10O95999 233 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 TP53P04637 393 aaPredicted RBP20.55■□□□□ 0.88
HOMER3-205ENST00000542541 HLA-DOBP13765 273 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 RPS6KA3P51812 740 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 CRISP1P54107 249 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 HSPB2Q16082 182 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 FBXW10Q5XX13 1052 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 THSD4Q6ZMP0 1018 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 FAM214BQ7L5A3 538 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 HDDC2Q7Z4H3 204 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 RDH12Q96NR8 316 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 KATNB1Q9BVA0 655 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 POLDIP3Q9BY77 421 aaKnown RBP20.55■□□□□ 0.88
HOMER3-205ENST00000542541 ENKD1Q9H0I2 346 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 TXNIPQ9H3M7 391 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 NRIP3Q9NQ35 241 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 CLEC4AQ9UMR7 237 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 BAIAP2Q9UQB8 552 aa20.55■□□□□ 0.88
HOMER3-205ENST00000542541 NOSIPQ9Y314 301 aaKnown RBP20.55■□□□□ 0.88
HOMER3-205ENST00000542541 NBASA2RRP1 2371 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 ZNF462Q96JM2 2506 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 TRAF3IP2O43734 574 aaPredicted RBP20.54■□□□□ 0.88
HOMER3-205ENST00000542541 TOXO94900 526 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 TMIGD3P0DMS9 266 aaPredicted RBP20.54■□□□□ 0.88
HOMER3-205ENST00000542541 APEHP13798 732 aaKnown RBP20.54■□□□□ 0.88
HOMER3-205ENST00000542541 IFNGR1P15260 489 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 ACKR1Q16570 336 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 CLEC12AQ5QGZ9 265 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 GPR139Q6DWJ6 353 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 MTFR2Q6P444 385 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 IGFN1Q86VF2 1251 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 GCNT2Q8N0V5 402 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 OR2T33Q8NG76 320 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 RND1Q92730 232 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 TEX12Q9BXU0 123 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 PLA2G12AQ9BZM1 189 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 GRHPRQ9UBQ7 328 aa20.54■□□□□ 0.88
HOMER3-205ENST00000542541 ZNF726A6NNF4 738 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 IDH3BO43837 385 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 IGHMP01871 453 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 UQCRFS1P47985 274 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 PTDSS1P48651 473 aaKnown RBP20.53■□□□□ 0.88
HOMER3-205ENST00000542541 CLDN17P56750 224 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 SLC27A4Q6P1M0 643 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 NHLRC1Q6VVB1 395 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 ZIC4Q8N9L1 334 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 NRG4Q8WWG1 115 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 TMEM45BQ96B21 275 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 ZNF775Q96BV0 537 aaPredicted RBP20.53■□□□□ 0.88
HOMER3-205ENST00000542541 ADAD1Q96M93 576 aaKnown RBP20.53■□□□□ 0.88
HOMER3-205ENST00000542541 ZNF385AQ96PM9 386 aaKnown RBP20.53■□□□□ 0.88
HOMER3-205ENST00000542541 RCE1Q9Y256 329 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 ARPC3O15145 178 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 MRPL33O75394 65 aaKnown RBP20.53■□□□□ 0.88
HOMER3-205ENST00000542541 IGFBP1P08833 259 aaPredicted RBP20.53■□□□□ 0.88
HOMER3-205ENST00000542541 CTSSP25774 331 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 NOS3P29474 1203 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 AGTR1P30556 359 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 GIPRP48546 466 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 RPL27P61353 136 aaKnown RBP20.53■□□□□ 0.88
HOMER3-205ENST00000542541 ERVK-25P63136 954 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 NPRL3Q12980 569 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 GUSBP1Q15486 140 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 FAM205BPQ63HN1 556 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 AAED1Q7RTV5 226 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 FJX1Q86VR8 437 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 MARVELD2Q8N4S9 558 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 OR8D4Q8NGM9 314 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 GABARAPL3Q9BY60 117 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 RIBC2Q9H4K1 309 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 MED29Q9NX70 200 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 SMPD3Q9NY59 655 aaPredicted RBP20.53■□□□□ 0.88
HOMER3-205ENST00000542541 ZNF346Q9UL40 294 aaKnown RBP20.53■□□□□ 0.88
HOMER3-205ENST00000542541 IER3IP1Q9Y5U9 82 aa20.53■□□□□ 0.88
HOMER3-205ENST00000542541 IMPA2O14732 288 aa20.52■□□□□ 0.88
HOMER3-205ENST00000542541 PPP1R3DO95685 299 aa20.52■□□□□ 0.88
HOMER3-205ENST00000542541 C4orf17Q53FE4 359 aa20.52■□□□□ 0.88
HOMER3-205ENST00000542541 CNEP1R1Q8N9A8 125 aa20.52■□□□□ 0.88
HOMER3-205ENST00000542541 OR6X1Q8NH79 312 aa20.52■□□□□ 0.88
HOMER3-205ENST00000542541 TXNDC15Q96J42 360 aa20.52■□□□□ 0.88
HOMER3-205ENST00000542541 ERMAPQ96PL5 475 aaPredicted RBP20.52■□□□□ 0.88
HOMER3-205ENST00000542541 SFXN3Q9BWM7 321 aa20.52■□□□□ 0.88
HOMER3-205ENST00000542541 A6NIZ1 184 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 BHLHE40O14503 412 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 LRRTM2O43300 516 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 SDHAP31040 664 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 OPRM1P35372 400 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 SMSP52788 366 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 BIDP55957 195 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 RAP1BP61224 184 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 RAP1AP62834 184 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 TOP3AQ13472 1001 aaPredicted RBP20.51■□□□□ 0.87
HOMER3-205ENST00000542541 GINS1Q14691 196 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 PTGES3Q15185 160 aaKnown RBP20.51■□□□□ 0.87
HOMER3-205ENST00000542541 LNX2Q8N448 690 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 OR6K3Q8NGY3 331 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 ZNF570Q96NI8 536 aa20.51■□□□□ 0.87
HOMER3-205ENST00000542541 ZNF629Q9UEG4 869 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms