RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PRAMEF2O60811 474 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 SH3BGRLO75368 114 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 MTX2O75431 263 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 RBBP9O75884 186 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 NCR1O76036 304 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 NDUFB6O95139 128 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 RASGRP1O95267 797 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 MPC2O95563 127 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 MELTFP08582 738 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 CHRM5P08912 532 aaPredicted RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 MGMTP16455 207 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 HOXA1P49639 335 aaPredicted RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 ART1P52961 327 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 RPS26P62854 115 aaKnown RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 SIRPAP78324 504 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 GGTLC2Q14390 218 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 ALG11Q2TAA5 492 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 ARHGAP11BQ3KRB8 267 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 WDR88Q6ZMY6 472 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 RAB11FIP2Q7L804 512 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 GDF7Q7Z4P5 450 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 WDR53Q7Z5U6 358 aaPredicted RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 LRRTM4Q86VH4 590 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 NRMQ8IXM6 262 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 ZFP41Q8N8Y5 198 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 DNAAF1Q8NEP3 725 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 NUP43Q8NFH3 380 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 OR2L5Q8NG80 312 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 OR11H4Q8NGC9 324 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 OR6M1Q8NGM8 313 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 OR5M9Q8NGP3 310 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 OR4Q3Q8NH05 313 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 OIT3Q8WWZ8 545 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 OR1E3Q8WZA6 343 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 GIMAP5Q96F15 307 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 ELMOD3Q96FG2 381 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 OR7D2Q96RA2 312 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 F2RL3Q96RI0 385 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 TIMM29Q9BSF4 260 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 PIGMQ9H3S5 423 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 HRASLSQ9HDD0 168 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 MYOZ1Q9NP98 299 aaPredicted RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 HINT3Q9NQE9 182 aaKnown RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 SIDT1Q9NXL6 827 aaKnown RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 PPIEQ9UNP9 301 aaKnown RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 PCYT1BQ9Y5K3 369 aaPredicted RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 HRH3Q9Y5N1 445 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 SPACA6W5XKT8 324 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 FLNBO75369 2602 aaKnown RBP9.52□□□□□ -0.89
CHFR-219ENST00000541341 A0A0G2JK05 382 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 RAB19A4D1S5 217 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 ACOD1A6NK06 481 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 TMEM200CA6NKL6 621 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 CPSF4LA6NMK7 179 aaKnown RBP9.51□□□□□ -0.89
CHFR-219ENST00000541341 FAM25EA8MYX2 175 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 B4DGG1 531 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 LMO7DNF2Z398 122 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 F5H5P2 479 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 MEN1O00255 615 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 BHLHE40O14503 412 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 PHYHO14832 338 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 OR1F1O43749 312 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 CHRM4P08173 479 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 SLC35G4P0C7Q5 338 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 FAM87AP0C7U9 286 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 GABRA1P14867 456 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 ZNF250P15622 560 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 CXCL3P19876 107 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 PDHA2P29803 388 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 PBLDP30039 288 aaPredicted RBP9.51□□□□□ -0.89
CHFR-219ENST00000541341 SOX18P35713 384 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 CENPAP49450 140 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 BLKP51451 505 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 MAP2K6P52564 334 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 ACTBP60709 375 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 ACTG1P63261 375 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 PRDX1Q06830 199 aaKnown RBP9.51□□□□□ -0.89
CHFR-219ENST00000541341 BTN1A1Q13410 526 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 DOC2BQ14184 412 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 ZNF345Q14585 488 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 LASP1Q14847 261 aaKnown RBP9.51□□□□□ -0.89
CHFR-219ENST00000541341 CDK5R1Q15078 307 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 PON3Q15166 354 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 LINC00303Q3SY05 128 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 CCSMST1Q4G0I0 132 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 CLEC12AQ5QGZ9 265 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 VASNQ6EMK4 673 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 SLC48A1Q6P1K1 146 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 PLBD1Q6P4A8 553 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 USP53Q70EK8 1073 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 TMUB2Q71RG4 321 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 GLCCI1Q86VQ1 547 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 NRROSQ86YC3 692 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 SPAG16Q8N0X2 631 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
CHFR-219ENST00000541341 SNX33Q8WV41 574 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 TMEM239Q8WW34 195 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 SMPDL3BQ92485 455 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 GHSRQ92847 366 aa9.51□□□□□ -0.89
CHFR-219ENST00000541341 SAMD8Q96LT4 415 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms