RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 C16orf89Q6UX73 402 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 SSX8Q7RTT4 187 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 C20orf196Q8IYI0 205 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 LIPHQ8WWY8 451 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 SGTBQ96EQ0 304 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 HS6ST2Q96MM7 605 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 FOXC2Q99958 501 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 CXXC4Q9H2H0 198 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 ESRP2Q9H6T0 727 aaKnown RBP14.8□□□□□ -0.04
CD9-209ENST00000540891 RPS6KA6Q9UK32 745 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 MED31Q9Y3C7 131 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 RNF115Q9Y4L5 304 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 B2RBV5 119 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 AKAP8O43823 692 aaKnown RBP14.79□□□□□ -0.04
CD9-209ENST00000540891 OR6A2O95222 327 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 CD3EP07766 207 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 TSPAN19P0C672 248 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 UMPSP11172 480 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 IFNGR1P15260 489 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 MXRA7P84157 204 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 DEFB113Q30KQ7 82 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 TBRG1Q3YBR2 411 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 IQCCQ4KMZ1 466 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 CARD17Q5XLA6 110 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 ADAM5Q6NVV9 412 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 NANOGNBQ7Z5D8 188 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 PIK3C3Q8NEB9 887 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 ANKK1Q8NFD2 765 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 KBTBD8Q8NFY9 601 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 IGFBPL1Q8WX77 278 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 AKAP1Q92667 903 aaKnown RBP eCLIP14.79□□□□□ -0.04
CD9-209ENST00000540891 BCL2L2Q92843 193 aaPredicted RBP14.79□□□□□ -0.04
CD9-209ENST00000540891 NEUROG1Q92886 237 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 C7orf34Q96L11 122 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 FNDC11Q9BVV2 318 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 C1QTNF6Q9BXI9 259 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 CRLF2Q9HC73 371 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 GPR35Q9HC97 309 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 NDE1Q9NXR1 346 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 NDUFAF4Q9P032 175 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 MAGEL2Q9UJ55 1249 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 EDARQ9UNE0 448 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 SAMD4AQ9UPU9 718 aaKnown RBP14.79□□□□□ -0.04
CD9-209ENST00000540891 ENPP4Q9Y6X5 453 aa14.79□□□□□ -0.04
CD9-209ENST00000540891 SHISA9B4DS77 424 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 M0R3G1 203 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 ARPC2O15144 300 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 CLOCKO15516 846 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 SEMG1P04279 462 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 ZNF83P51522 516 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 MNAT1P51948 309 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 BIDP55957 195 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 VLDLRP98155 873 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 RPL18Q07020 188 aaKnown RBP14.78□□□□□ -0.04
CD9-209ENST00000540891 CAMK2DQ13557 499 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 TRAM2Q15035 370 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 CEACAM16Q2WEN9 425 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 HMBOX1Q6NT76 420 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 SPNS3Q6ZMD2 512 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 RINLQ6ZS11 566 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 SLC35D2Q76EJ3 337 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 GPR137CQ8N3F9 429 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 LRR1Q96L50 414 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 AMDHD2Q9Y303 409 aa14.78□□□□□ -0.04
CD9-209ENST00000540891 ALPK2Q86TB3 2170 aa14.77□□□□□ -0.04
CD9-209ENST00000540891 A0A087WUU8 490 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 A0A096LPE4 126 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 A0A1W2PPZ6 126 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 BLOC1S5-TXNDC5H3BN57 136 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 HS3ST1O14792 307 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 RNF13O43567 381 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 HIST1H2ABP04908 130 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 IFI30P13284 250 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 MAKP20794 623 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 CALB2P22676 271 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 CD40P25942 277 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 IFNA8P32881 189 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 AQP2P41181 271 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 PRPS1P60891 318 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 ARF1P84077 181 aaKnown RBP14.77□□□□□ -0.05
CD9-209ENST00000540891 SPOCK1Q08629 439 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 MELKQ14680 651 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 SPATS1Q496A3 300 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 C20orf204Q6ZNR8 217 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 HIST3H2AQ7L7L0 130 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 MEX3DQ86XN8 651 aaKnown RBP14.77□□□□□ -0.05
CD9-209ENST00000540891 NRMQ8IXM6 262 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 ZNF611Q8N823 705 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 OR6X1Q8NH79 312 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 MOSPD2Q8NHP6 518 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 MAGEE2Q8TD90 523 aaPredicted RBP14.77□□□□□ -0.05
CD9-209ENST00000540891 BCAS4Q8TDM0 211 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 ACOT11Q8WXI4 607 aaPredicted RBP14.77□□□□□ -0.05
CD9-209ENST00000540891 HIST1H2ACQ93077 130 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 ALPK1Q96QP1 1244 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 NMNAT1Q9HAN9 279 aaPredicted RBP14.77□□□□□ -0.05
CD9-209ENST00000540891 V9GYQ6 96 aa14.77□□□□□ -0.05
CD9-209ENST00000540891 ZNF726A6NNF4 738 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 hCG_2039718K7EN88 272 aa14.76□□□□□ -0.05
CD9-209ENST00000540891 M0R1B8 84 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms