RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 TRAV27A0A087WT01 109 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 SLC35F4A4IF30 521 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 SLC43A1O75387 559 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 DEAF1O75398 565 aaPredicted RBP13.7□□□□□ -0.22
DDB1-218ENST00000540784 E2F6O75461 281 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 BCL10O95999 233 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 GASTP01350 101 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 FASP25445 335 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 PEX19P40855 299 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 ARHGDIAP52565 204 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 PRPS1P60891 318 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 FAPQ12884 760 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 TSPO2Q5TGU0 170 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 PGBD2Q6P3X8 592 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 GABRG1Q8N1C3 465 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 POMGNT2Q8NAT1 580 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 GIPC3Q8TF64 312 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 ADAD1Q96M93 576 aaKnown RBP13.7□□□□□ -0.22
DDB1-218ENST00000540784 GPA33Q99795 319 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 NDEL1Q9GZM8 345 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 SLCO5A1Q9H2Y9 848 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 DENND2DQ9H6A0 471 aaPredicted RBP13.7□□□□□ -0.22
DDB1-218ENST00000540784 SLC7A10Q9NS82 523 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 ASB6Q9NWX5 421 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 MED29Q9NX70 200 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 GPR52Q9Y2T5 361 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 DOPEY1Q5JWR5 2465 aa13.7□□□□□ -0.22
DDB1-218ENST00000540784 KLF4O43474 513 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 ZNF432O94892 652 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 FCGR1AP12314 374 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 FPR3P25089 353 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 COL8A1P27658 744 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 UGT2B10P36537 528 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 RPL4P36578 427 aaKnown RBP13.69□□□□□ -0.22
DDB1-218ENST00000540784 IST1P53990 364 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 BIDP55957 195 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 CTXN1P60606 82 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 RPS4XP62701 263 aaKnown RBP13.69□□□□□ -0.22
DDB1-218ENST00000540784 TSPAN31Q12999 210 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 ITGADQ13349 1161 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 CAMK2DQ13557 499 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 FHL1Q13642 323 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 SFRP5Q5T4F7 317 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 CARD17Q5XLA6 110 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 ZNF770Q6IQ21 691 aaPredicted RBP13.69□□□□□ -0.22
DDB1-218ENST00000540784 MEX3BQ6ZN04 569 aaKnown RBP13.69□□□□□ -0.22
DDB1-218ENST00000540784 CXorf67Q86X51 503 aaPredicted RBP13.69□□□□□ -0.22
DDB1-218ENST00000540784 AQP11Q8NBQ7 271 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 OR9Q2Q8NGE9 314 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 OR6X1Q8NH79 312 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 OR2M2Q96R28 347 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 SPOCK3Q9BQ16 436 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 BDH2Q9BUT1 245 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 ENKD1Q9H0I2 346 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 MCCC2Q9HCC0 563 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 NDRG3Q9UGV2 375 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 MGAT4BQ9UQ53 548 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 SIGLEC7Q9Y286 467 aa13.69□□□□□ -0.22
DDB1-218ENST00000540784 INTS1Q8N201 2190 aaKnown RBP13.69□□□□□ -0.22
DDB1-218ENST00000540784 LRRK2Q5S007 2527 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 MCIDASD6RGH6 385 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 UPK3AO75631 287 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 NDUFB2O95178 105 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 KIR2DL3P43628 341 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 GSSP48637 474 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 DAP3P51398 398 aaKnown RBP13.68□□□□□ -0.22
DDB1-218ENST00000540784 SORDQ00796 357 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 SNTB1Q13884 538 aaKnown RBP13.68□□□□□ -0.22
DDB1-218ENST00000540784 ATP6AP1Q15904 470 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 ACKR1Q16570 336 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 ZFP1Q6P2D0 407 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 SMARCD3Q6STE5 483 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 STAC2Q6ZMT1 411 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 ABHD12BQ7Z5M8 362 aaPredicted RBP13.68□□□□□ -0.22
DDB1-218ENST00000540784 TMEM179BQ7Z7N9 219 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 DMRTC2Q8IXT2 367 aaPredicted RBP13.68□□□□□ -0.22
DDB1-218ENST00000540784 C20orf196Q8IYI0 205 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 GPR137CQ8N3F9 429 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 LRRC75AQ8NAA5 344 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 STEAP2Q8NFT2 490 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 OR10G2Q8NGC3 310 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 OR6N1Q8NGY5 312 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 PYDC1Q8WXC3 89 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 SLC25A44Q96H78 314 aaPredicted RBP13.68□□□□□ -0.22
DDB1-218ENST00000540784 LRR1Q96L50 414 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 LINC00470Q9BZP3 86 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 TXNIPQ9H3M7 391 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 NTN4Q9HB63 628 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 SLC24A3Q9HC58 644 aa13.68□□□□□ -0.22
DDB1-218ENST00000540784 PDP1Q9P0J1 537 aaPredicted RBP13.68□□□□□ -0.22
DDB1-218ENST00000540784 ZNF346Q9UL40 294 aaKnown RBP13.68□□□□□ -0.22
DDB1-218ENST00000540784 CIB4A0PJX0 185 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 ERICH4A6NGS2 130 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 TUBAL3A6NHL2 446 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 COX6B1P14854 86 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 IGFBP2P18065 325 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 PSMB1P20618 241 aaKnown RBP13.67□□□□□ -0.22
DDB1-218ENST00000540784 GSTM3P21266 225 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 IGHV1-2P23083 117 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 IL32P24001 234 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms