RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 NXPE2Q96DL1 559 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 TIMP4Q99727 224 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 SRA1Q9HD15 236 aaKnown RBP22.04■■□□□ 1.12
TTC3-225ENST00000540756 CORINQ9Y5Q5 1042 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 LRRTM2O43300 516 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 NOL3O60936 208 aaKnown RBP22.04■■□□□ 1.12
TTC3-225ENST00000540756 GTF2E2P29084 291 aaKnown RBP22.04■■□□□ 1.12
TTC3-225ENST00000540756 CLN3Q13286 438 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 ARIH2OSQ8N7S6 290 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 ZNF485Q8NCK3 441 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 OR6K6Q8NGW6 343 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 SMPDL3BQ92485 455 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 SYT4Q9H2B2 425 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 ISG20L2Q9H9L3 353 aaKnown RBP22.04■■□□□ 1.12
TTC3-225ENST00000540756 CHST11Q9NPF2 352 aa22.04■■□□□ 1.12
TTC3-225ENST00000540756 CHCHD3Q9NX63 227 aaKnown RBP22.04■■□□□ 1.12
TTC3-225ENST00000540756 PNMA8CA0A1B0GUJ8 204 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 TRIM64BA6NI03 449 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 LALBAP00709 142 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 TFP02787 698 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 SPINK2P20155 84 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 CNR1P21554 472 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 ACVR1BP36896 505 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 NAA10P41227 235 aaPredicted RBP22.03■■□□□ 1.12
TTC3-225ENST00000540756 WNT4P56705 351 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 RPL27P61353 136 aaKnown RBP22.03■■□□□ 1.12
TTC3-225ENST00000540756 NCS1P62166 190 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 RSPO4Q2I0M5 234 aaPredicted RBP22.03■■□□□ 1.12
TTC3-225ENST00000540756 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.03■■□□□ 1.121e-6■■□□□ 13.8
TTC3-225ENST00000540756 LINC01590Q5TEZ4 76 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 PM20D2Q8IYS1 436 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 OR6V1Q8N148 313 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 ZNF519Q8TB69 540 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 OR51E2Q9H255 320 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 TXNIPQ9H3M7 391 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 TIMMDC1Q9NPL8 285 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 ALKBH4Q9NXW9 302 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 HAO2Q9NYQ3 351 aa22.03■■□□□ 1.12
TTC3-225ENST00000540756 TMEM129A0AVI4 362 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 H0YC42 278 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 GFRA3O60609 400 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 SCG5P05408 212 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 OR2B6P58173 313 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 B3GALT5-AS1P59052 145 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 EMC4Q5J8M3 183 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 GPR139Q6DWJ6 353 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 ATCAYQ86WG3 371 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 SCAIQ8N9R8 606 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 TTTY10Q9BZA0 68 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 RNF167Q9H6Y7 350 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 RYDENQ9NUL5 291 aaKnown RBP22.02■■□□□ 1.12
TTC3-225ENST00000540756 SELENOFO60613 162 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 RAMP1O60894 148 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 ZNF182P17025 639 aaPredicted RBP22.02■■□□□ 1.12
TTC3-225ENST00000540756 CASRP41180 1078 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 DIO1P49895 249 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 NFATC3Q12968 1075 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 MFSD13AQ14CX5 517 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 PON3Q15166 354 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 SSX6Q7RTT6 188 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 ACBD7Q8N6N7 88 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 ZFP41Q8N8Y5 198 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 ZNF511Q8NB15 262 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 TXNDC15Q96J42 360 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 NDEL1Q9GZM8 345 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 RERGLQ9H628 205 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 MED29Q9NX70 200 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 ABI3Q9P2A4 366 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 B3GAT1Q9P2W7 334 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 KLK13Q9UKR3 277 aa22.02■■□□□ 1.12
TTC3-225ENST00000540756 SPIN1Q9Y657 262 aaPredicted RBP22.02■■□□□ 1.12
TTC3-225ENST00000540756 SPENQ96T58 3664 aaKnown RBP22.01■■□□□ 1.11
TTC3-225ENST00000540756 GPANK1O95872 356 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 IFNGR1P15260 489 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 P2RY4P51582 365 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 RPS3AP61247 264 aaKnown RBP22.01■■□□□ 1.11
TTC3-225ENST00000540756 TMED1Q13445 227 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 LIPKQ5VXJ0 399 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 ERI1Q8IV48 349 aaKnown RBP22.01■■□□□ 1.11
TTC3-225ENST00000540756 SULF2Q8IWU5 870 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 FAM83FQ8NEG4 500 aaPredicted RBP22.01■■□□□ 1.11
TTC3-225ENST00000540756 NDNFQ8TB73 568 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 SPRYD4Q8WW59 207 aaPredicted RBP22.01■■□□□ 1.11
TTC3-225ENST00000540756 DMXL2Q8TDJ6 3036 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 A0A1W2PQL4 384 aaPredicted RBP22.01■■□□□ 1.11
TTC3-225ENST00000540756 TRAPPC6AO75865 159 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 SRD5A2P31213 254 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 POU3F1Q03052 451 aaPredicted RBP22.01■■□□□ 1.11
TTC3-225ENST00000540756 ZNF85Q03923 595 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 ZP4Q12836 540 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 C1DQ13901 141 aaKnown RBP22.01■■□□□ 1.11
TTC3-225ENST00000540756 ARMC4Q5T2S8 1044 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 OTPQ5XKR4 325 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 OR2M7Q8NG81 312 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 OR14L1PQ8NHC6 308 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 SLC25A43Q8WUT9 341 aaPredicted RBP22.01■■□□□ 1.11
TTC3-225ENST00000540756 THAP4Q8WY91 577 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 ALG12Q9BV10 488 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 JAM3Q9BX67 310 aa22.01■■□□□ 1.11
TTC3-225ENST00000540756 NUAK2Q9H093 628 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms