RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 PSAPL1Q6NUJ1 521 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 TMPPEQ6ZT21 453 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ACOT7LQ6ZUV0 252 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 GPSM1Q86YR5 675 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 BEST3Q8N1M1 668 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 POGLUT1Q8NBL1 392 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 TERB2Q8NHR7 220 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 SECTM1Q8WVN6 248 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ASB13Q8WXK3 278 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ARSGQ96EG1 525 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 KIRREL1Q96J84 757 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 FSD1LQ9BXM9 530 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 SLC26A1Q9H2B4 701 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 SRMSQ9H3Y6 488 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 LRTM1Q9HBL6 345 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 LPAR3Q9UBY5 353 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 MAN2B1O00754 1011 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 AGPAT2O15120 278 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ADAP00813 363 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 IGHEP01854 428 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 PPBPP02775 128 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 HKR1P10072 659 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 GALP22466 123 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 DCTDP32321 178 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 RENBPP51606 427 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 RPS14P62263 151 aaKnown RBP8.68□□□□□ -1.02
CLIP1-214ENST00000540539 LRRC37A5PQ49AS3 106 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 PKDCCQ504Y2 493 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF697Q5TEC3 545 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 C1orf53Q5VUE5 145 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 MRNIPQ6NTE8 343 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 SMARCD3Q6STE5 483 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF621Q6ZSS3 439 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 CLEC20AQ6ZU45 233 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 FAM160A2Q8N612 972 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-214ENST00000540539 OR5D16Q8NGK9 328 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 OR4K15Q8NH41 348 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 HPSE2Q8WWQ2 592 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 MR1Q95460 341 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 SLC25A38Q96DW6 304 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 TSSK3Q96PN8 268 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 PANX1Q96RD7 426 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 LMF1Q96S06 567 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF2Q9BSG1 426 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-214ENST00000540539 POPDC3Q9HBV1 291 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 MRPS18AQ9NVS2 196 aaKnown RBP8.68□□□□□ -1.02
CLIP1-214ENST00000540539 MMP24Q9Y5R2 645 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 A0A087WZY1 265 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 TRBV4-1A0A0J9YWV2 114 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 TMEM269A0A1B0GVZ9 245 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 TMEM235A6NFC5 223 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 H7C417 338 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 K7ERQ8 282 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 DVL1O14640 695 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 TLR5O60602 858 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ADAP1O75689 374 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ZFPL1O95159 310 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 LRATO95237 230 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 CD8AP01732 235 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 CD14P08571 375 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 CDH11P55287 796 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ZXDBP98169 803 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 OR5I1Q13606 314 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF235Q14590 738 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 HERPUD1Q15011 391 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 C18orf21Q32NC0 220 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-214ENST00000540539 GXYLT1Q4G148 440 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 C11orf87Q6NUJ2 197 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 UBE2R2Q712K3 238 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-214ENST00000540539 SLC30A7Q8NEW0 376 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 OR52N4Q8NGI2 321 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ACTR3CQ9C0K3 210 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-214ENST00000540539 MFSD1Q9H3U5 465 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 IL21RQ9HBE5 538 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 RDH14Q9HBH5 336 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 POT1Q9NUX5 634 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ASIC5Q9NY37 505 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 FAM50BQ9Y247 325 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-214ENST00000540539 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ANKRD20A5PA0PJZ0 165 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF705GA8MUZ8 300 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-214ENST00000540539 MAGEB17A8MXT2 336 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 K7EP13 123 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ALOX12BO75342 701 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 FBXO24O75426 580 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ATP1B1P05026 303 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 FCGR3AP08637 254 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 EPB42P16452 691 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ATF1P18846 271 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 EPHA1P21709 976 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 TACR1P25103 407 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 CD1CP29017 333 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 RPS23P62266 143 aaKnown RBP8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ENPP2Q13822 863 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF674Q2M3X9 581 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 Q5PR19 223 aa8.67□□□□□ -1.02
CLIP1-214ENST00000540539 HENMT1Q5T8I9 393 aaKnown RBP8.67□□□□□ -1.02
CLIP1-214ENST00000540539 TMEM220Q6QAJ8 160 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms