RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ADA2Q9NZK5 511 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 NOX1Q9Y5S8 564 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 USF3Q68DE3 2245 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 PLCE1Q9P212 2302 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 A0A096LPE4 126 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 A0A1W2PPZ6 126 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 OR6C65A6NJZ3 312 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 SEC14L2O76054 403 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 PRSS23O95084 383 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 UMPSP11172 480 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 FUT1P19526 365 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 CD40P25942 277 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 HOXC12P31275 282 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 TUBA1BP68363 451 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 TUBA4AP68366 448 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 CAMK2DQ13557 499 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 MELKQ14680 651 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 CEACAM16Q2WEN9 425 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 TUBA1AQ71U36 451 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 ABHD12BQ7Z5M8 362 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-212ENST00000540230 PXKQ7Z7A4 578 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 FITM2Q8N6M3 262 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 LZICQ8WZA0 190 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 BCL2L2Q92843 193 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-212ENST00000540230 FAM162AQ96A26 154 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 BOD1Q96IK1 185 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 CRLF2Q9HC73 371 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 TAGLN3Q9UI15 199 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 ZNF229Q9UJW7 825 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 AMDHD2Q9Y303 409 aa13.18□□□□□ -0.3
UBE3B-212ENST00000540230 HEATR1Q9H583 2144 aaKnown RBP13.17□□□□□ -0.3
UBE3B-212ENST00000540230 ZNF503-AS2A6NEH8 195 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 RPL36A-HNRNPH2H7BZ11 118 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 M0R3G1 203 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 DCTN3O75935 186 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 OR7A10O76100 309 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 IFNW1P05000 195 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 SOD3P08294 240 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 DANCRP0C864 163 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 IFNGR1P15260 489 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 TCN1P20061 433 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-212ENST00000540230 MSX2P35548 267 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-212ENST00000540230 RBM34P42696 430 aaKnown RBP13.17□□□□□ -0.3
UBE3B-212ENST00000540230 ARF1P84077 181 aaKnown RBP13.17□□□□□ -0.3
UBE3B-212ENST00000540230 ZP4Q12836 540 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 IFI44LQ53G44 452 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 GLYATQ6IB77 296 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 HMBOX1Q6NT76 420 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 B3GLCTQ6Y288 498 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 MEX3DQ86XN8 651 aaKnown RBP13.17□□□□□ -0.3
UBE3B-212ENST00000540230 C20orf196Q8IYI0 205 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 GPR137CQ8N3F9 429 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 ANKS4BQ8N8V4 417 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 PIK3C3Q8NEB9 887 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 GEMIN6Q8WXD5 167 aaKnown RBP13.17□□□□□ -0.3
UBE3B-212ENST00000540230 PIGTQ969N2 578 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 FBXW5Q969U6 566 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 PIP5K1AQ99755 562 aa13.17□□□□□ -0.3
UBE3B-212ENST00000540230 NDUFAB1O14561 156 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 AKAP8O43823 692 aaKnown RBP13.16□□□□□ -0.3
UBE3B-212ENST00000540230 THRBP10828 461 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 CDH11P55287 796 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 BIDP55957 195 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 PRPS1P60891 318 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 ST3GAL3Q11203 375 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 TMEM108Q6UXF1 575 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 FKBP9P1Q75LS8 142 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 SLC35D2Q76EJ3 337 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 SSX8Q7RTT4 187 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 NANOGNBQ7Z5D8 188 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 TGIF2LYQ8IUE0 185 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 OFCC1Q8IZS5 231 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 PGAM4Q8N0Y7 254 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 SGTBQ96EQ0 304 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 PERPQ96FX8 193 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 LAMP3Q9UQV4 416 aa13.16□□□□□ -0.3
UBE3B-212ENST00000540230 MAGED1Q9Y5V3 778 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-212ENST00000540230 ACANP16112 2415 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 BLOC1S5-TXNDC5H3BN57 136 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 RNF13O43567 381 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 SMPD2O60906 423 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 OR6A2O95222 327 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 FAM107AO95990 144 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 F13BP05160 661 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 PTAFRP25105 342 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 AQP2P41181 271 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 NKX6-1P78426 367 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-212ENST00000540230 RPL18Q07020 188 aaKnown RBP13.15□□□□□ -0.3
UBE3B-212ENST00000540230 ANKRD16Q6P6B7 361 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 KLHL17Q6TDP4 642 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 KLHL24Q6TFL4 600 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 MYPOPQ86VE0 399 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-212ENST00000540230 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 MOSPD2Q8NHP6 518 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 SMAP2Q8WU79 429 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-212ENST00000540230 CDRT15Q96T59 188 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 TMUB1Q9BVT8 246 aa13.15□□□□□ -0.3
UBE3B-212ENST00000540230 SEC61A2Q9H9S3 476 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms