RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ITGB1BP2Q9UKP3 347 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 SNX13Q9Y5W8 968 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 PRR14LQ5THK1 2151 aa11.76□□□□□ -0.53
CCDC130-202ENST00000540216 ZNF726A6NNF4 738 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 B2RBV5 119 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 C11orf98E9PRG8 122 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 HS3ST1O14792 307 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 FFAR1O14842 300 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
CCDC130-202ENST00000540216 ITGA2P17301 1181 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 CD53P19397 219 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 TCN1P20061 433 aaPredicted RBP11.75□□□□□ -0.53
CCDC130-202ENST00000540216 PRPS1P60891 318 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 ROR2Q01974 943 aaKnown RBP11.75□□□□□ -0.53
CCDC130-202ENST00000540216 BSPH1Q075Z2 132 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 LGALS3BPQ08380 585 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 TESK1Q15569 626 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 ACKR1Q16570 336 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 ANKRD16Q6P6B7 361 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 HDDC2Q7Z4H3 204 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 RNF113BQ8IZP6 322 aaKnown RBP11.75□□□□□ -0.53
CCDC130-202ENST00000540216 LRRC17Q8N6Y2 441 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 FAM156AQ8NDB6 213 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 MAGEE2Q8TD90 523 aaPredicted RBP11.75□□□□□ -0.53
CCDC130-202ENST00000540216 BCAS4Q8TDM0 211 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 ACOT11Q8WXI4 607 aaPredicted RBP11.75□□□□□ -0.53
CCDC130-202ENST00000540216 PIGTQ969N2 578 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 RADILQ96JH8 1075 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 NSMCE2Q96MF7 247 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 CXXC4Q9H2H0 198 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 UBTD1Q9HAC8 227 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 GPR35Q9HC97 309 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 MAN2C1Q9NTJ4 1040 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 C20orf141Q9NUB4 165 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 CCM2LQ9NUG4 571 aaPredicted RBP11.75□□□□□ -0.53
CCDC130-202ENST00000540216 BEX4Q9NWD9 120 aaPredicted RBP11.75□□□□□ -0.53
CCDC130-202ENST00000540216 MED29Q9NX70 200 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 TAS2R5Q9NYW4 299 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 MGAT4BQ9UQ53 548 aa11.75□□□□□ -0.53
CCDC130-202ENST00000540216 FAM32AQ9Y421 112 aaKnown RBP11.75□□□□□ -0.53
CCDC130-202ENST00000540216 RAI1Q7Z5J4 1906 aaPredicted RBP11.74□□□□□ -0.53
CCDC130-202ENST00000540216 ROS1P08922 2347 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 ARPC4-TTLL3A0A0A6YYG9 625 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 SLC35F4A4IF30 521 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 DPRXA6NFQ7 191 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 ARPC2O15144 300 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 RNF13O43567 381 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 TMCC2O75069 709 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 PRSS23O95084 383 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 TSPAN19P0C672 248 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 IFNGR1P15260 489 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 RHCEP18577 417 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 CDH2P19022 906 aaPredicted RBP11.74□□□□□ -0.53
CCDC130-202ENST00000540216 FUT1P19526 365 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 PTAFRP25105 342 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 YAP1P46937 504 aaKnown RBP11.74□□□□□ -0.53
CCDC130-202ENST00000540216 ART1P52961 327 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 DEFB113Q30KQ7 82 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 TBRG1Q3YBR2 411 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 ANKDD1AQ495B1 522 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 SPNS3Q6ZMD2 512 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 SLC35D2Q76EJ3 337 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 LINGO2Q7L985 606 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 C20orf196Q8IYI0 205 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 WDR31Q8NA23 367 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 RBM15BQ8NDT2 890 aaKnown RBP11.74□□□□□ -0.53
CCDC130-202ENST00000540216 OR6X1Q8NH79 312 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 BPIFA2Q96DR5 249 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 PIP5K1AQ99755 562 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 MUC13Q9H3R2 512 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 NPAP1Q9NZP6 1156 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 NDUFAF4Q9P032 175 aa11.74□□□□□ -0.53
CCDC130-202ENST00000540216 STX18Q9P2W9 335 aaKnown RBP11.74□□□□□ -0.53
CCDC130-202ENST00000540216 A0A1W2PRG6 482 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 A0A1W2PRQ8 180 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 NPIPB13A6NJU9 1138 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 ZNF99A8MXY4 864 aaPredicted RBP11.73□□□□□ -0.53
CCDC130-202ENST00000540216 CENPBD1B2RD01 187 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 NPIPB4C9JG80 1138 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 BLOC1S5-TXNDC5H3BN57 136 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 J3KTA2 159 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 M0R3G1 203 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 CLOCKO15516 846 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 SERPINI2O75830 405 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 BCL10O95999 233 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 H1F0P07305 194 aaKnown RBP11.73□□□□□ -0.53
CCDC130-202ENST00000540216 IFI30P13284 250 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 DAP3P51398 398 aaKnown RBP11.73□□□□□ -0.53
CCDC130-202ENST00000540216 ZNF83P51522 516 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 BIDP55957 195 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 UBE2NP61088 152 aaKnown RBP11.73□□□□□ -0.53
CCDC130-202ENST00000540216 PRKCDQ05655 676 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 RPL18Q07020 188 aaKnown RBP11.73□□□□□ -0.53
CCDC130-202ENST00000540216 DGCR6Q14129 220 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 CEACAM16Q2WEN9 425 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 HIKESHIQ53FT3 197 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 MTX3Q5HYI7 312 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 CARD17Q5XLA6 110 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 ZNF730Q6ZMV8 503 aa11.73□□□□□ -0.53
CCDC130-202ENST00000540216 MBOAT2Q6ZWT7 520 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms