RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 DPPA2Q7Z7J5 298 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 ZNF615Q8N8J6 731 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 OR10R2Q8NGX6 335 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 OR4C6Q8NH72 309 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 PHOSPHO1Q8TCT1 267 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 C16orf78Q8WTQ4 265 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 APOOQ9BUR5 198 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 MVB12BQ9H7P6 319 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 C5AR2Q9P296 337 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 TESQ9UGI8 421 aaKnown RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 KLF2Q9Y5W3 355 aaPredicted RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 C2orf16Q68DN1 1984 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 ZNF821O75541 412 aaPredicted RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 ETHE1O95571 254 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 IFNA17P01571 189 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 CPN1P15169 458 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 CPT2P23786 658 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 HSD17B2P37059 387 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 AQP2P41181 271 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 PNLIPRP1P54315 467 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 EEF1A1P68104 462 aaKnown RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 EEF1A2Q05639 463 aaKnown RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 SLC36A2Q495M3 483 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 SCGB2B2Q4G0G5 96 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 EEF1A1P5Q5VTE0 462 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 FCRLAQ7L513 359 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 SYT9Q86SS6 491 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 EIF4E3Q8N5X7 224 aaKnown RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 OR1S2Q8NGQ3 325 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 OR6K3Q8NGY3 331 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 C4orf36Q96KX1 117 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 S100A13Q99584 98 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 ZMIZ1Q9ULJ6 1067 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 MSRB2Q9Y3D2 182 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 SOCS6O14544 535 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 UGDHO60701 494 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 CD160O95971 181 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 RECKO95980 971 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 CSN2P05814 226 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 SNRNP70P08621 437 aaKnown RBP7.98□□□□□ -1.13
DDB1-217ENST00000540166 TPT1P13693 172 aaKnown RBP7.98□□□□□ -1.13
DDB1-217ENST00000540166 MAPK3P27361 379 aaPredicted RBP7.98□□□□□ -1.13
DDB1-217ENST00000540166 SLC6A12P48065 614 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 TBPL1P62380 186 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 CXADRP78310 365 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 CHAF1BQ13112 559 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 SERTAD2Q14140 314 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 KHDRBS2Q5VWX1 349 aaKnown RBP7.98□□□□□ -1.13
DDB1-217ENST00000540166 RNF165Q6ZSG1 346 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 PRICKLE2Q7Z3G6 844 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 ARMC10Q8N2F6 343 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 LILRA3Q8N6C8 439 aaPredicted RBP7.98□□□□□ -1.13
DDB1-217ENST00000540166 GHSRQ92847 366 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 RAB3CQ96E17 227 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 ISG20L2Q9H9L3 353 aaKnown RBP7.98□□□□□ -1.13
DDB1-217ENST00000540166 NEUROD4Q9HD90 331 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 TAS2R8Q9NYW2 309 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 KLK11Q9UBX7 282 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 OPN4Q9UHM6 478 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 KLK13Q9UKR3 277 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 TSC2P49815 1807 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 TRBV2A0A0J9YWF9 115 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 C13orf42A0A1B0GVH6 325 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 PHYHO14832 338 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 SELENOFO60613 162 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 ZNF432O94892 652 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 ANKRD34CP0C6C1 535 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 C1GALT1C1LP0DN25 315 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 BDKRB2P30411 391 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 NTSP30990 170 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 EIF2S3P41091 472 aaKnown RBP7.98□□□□□ -1.13
DDB1-217ENST00000540166 ADAM8P78325 824 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 PRR5P85299 388 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 GAB4Q2WGN9 574 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 ZNF385BQ569K4 471 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 C3orf33Q6P1S2 294 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 OR2W3Q7Z3T1 314 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 C17orf64Q86WR6 236 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 HORMAD2Q8N7B1 307 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 ZNF248Q8NDW4 579 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 THAP4Q8WY91 577 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 OR1F2PQ96R84 312 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 SYNPO2LQ9H987 977 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 BRF2Q9HAW0 419 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 TINAGQ9UJW2 476 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 PCOLCE2Q9UKZ9 415 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 C1orf226A1L170 272 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 SLC22A31A6NKX4 558 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 C1QTNF9BB2RNN3 333 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 SEMA7AO75326 666 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 IFNGP01579 166 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 IL5P05113 134 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 C1QTNF9P0C862 333 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 VAMP1P23763 118 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 CD34P28906 385 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 HTR1FP30939 366 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 BTCP35070 178 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 UCNP55089 124 aa7.98□□□□□ -1.13
DDB1-217ENST00000540166 EIF5AP63241 154 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms