RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TVP23AA6NH52 213 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 C1QTNF3-AMACRE9PGA6 284 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 SULT1B1O43704 296 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 GPRIN2O60269 458 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 ITGA10O75578 1167 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 RAB40ALP0C0E4 278 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 GTF2F2P13984 249 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 AKR1C2P52895 323 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 AKR1C1Q04828 323 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 LEG1Q6P5S2 330 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 RD3Q7Z3Z2 195 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 LRRTM1Q86UE6 522 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 NAXDQ8IW45 347 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 CDRT4Q8N9R6 151 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 LSM14AQ8ND56 463 aaKnown RBP12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 CCL4L1Q8NHW4 92 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 RAB40AQ8WXH6 277 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 HDAC8Q9BY41 377 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 PCDHB16Q9NRJ7 776 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 DUSP22Q9NRW4 184 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 STARD5Q9NSY2 213 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 MRM2Q9UI43 246 aaKnown RBP12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 SLC22A7Q9Y694 548 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 OR2W5A6NFC9 320 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 BLOC1S5-TXNDC5H3BN57 136 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 H7C417 338 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 HRKO00198 91 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 SLC35G6P0C7Q6 338 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 PRICKLE4Q2TBC4 344 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 LINC01590Q5TEZ4 76 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 EID2Q8N6I1 236 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 ZNF75AQ96N20 296 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 ALG12Q9BV10 488 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 MTFP1Q9UDX5 166 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 FBXO4Q9UKT5 387 aa12.7□□□□□ -0.38
SCNN1A-215ENST00000540037 TRAV18A0A075B6X5 111 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 KCNAB3O43448 404 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 B3GALT2O43825 422 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 UPK3AO75631 287 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 LIPCP11150 499 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 PVRP15151 417 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 TMED4Q7Z7H5 227 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 SLC35F3Q8IY50 421 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 C12orf76Q8N812 135 aaPredicted RBP12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 PXT1Q8NFP0 134 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 BPIFCQ8NFQ6 507 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 OR5AK2Q8NH90 309 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 OR2A5Q96R48 311 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 ADAT1Q9BUB4 502 aaKnown RBP12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 RAB11FIP5Q9BXF6 653 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 SRA1Q9HD15 236 aaKnown RBP12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 CPNE7Q9UBL6 633 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 DTX4Q9Y2E6 619 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 CDC123O75794 336 aaPredicted RBP12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 ANXA2P07355 339 aaKnown RBP12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 TLX1P31314 330 aaPredicted RBP12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 CAPZA2P47755 286 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 MGAT2Q10469 447 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 ILF3Q12906 894 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 ATXN7L3Q14CW9 347 aaPredicted RBP12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 Q499Y3 187 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 ZNF684Q5T5D7 378 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 TMEM88Q6PEY1 159 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 LRRN1Q6UXK5 716 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 SLC39A5Q6ZMH5 540 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 NDUFAF7Q7L592 441 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 OR52R1Q8NGF1 315 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 SLC6A17Q9H1V8 727 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 POFUT1Q9H488 388 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 EXO5Q9H790 373 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 GLS2Q9UI32 602 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 ZNF337Q9Y3M9 751 aa12.69□□□□□ -0.38
SCNN1A-215ENST00000540037 CALCBP10092 127 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 HTRA4P83105 476 aaPredicted RBP12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 EXOSC6Q5RKV6 272 aaKnown RBP12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 LY6G6FQ5SQ64 297 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 MRPL43Q8N983 215 aaKnown RBP12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 CLRN3Q8NCR9 226 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 OR10G6Q8NH81 332 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 ATOH1Q92858 354 aaPredicted RBP12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 TMEM106AQ96A25 262 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 FOXN4Q96NZ1 517 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 FGF22Q9HCT0 170 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 PHPT1Q9NRX4 125 aaPredicted RBP12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 HPF1Q9NWY4 346 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 TAS2R3Q9NYW6 316 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 KLF15Q9UIH9 416 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 EYSQ5T1H1 3165 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 PSG6Q00889 435 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 MC2RQ01718 297 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 LGALS3BPQ08380 585 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 NKAIN2Q5VXU1 208 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 SHEQ5VZ18 495 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 RPS4Y2Q8TD47 263 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 ADAD1Q96M93 576 aaKnown RBP12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 SERINC2Q96SA4 455 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 PTDSS2Q9BVG9 487 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 SLC7A5P2Q9GIP4 190 aa12.68□□□□□ -0.38
SCNN1A-215ENST00000540037 ZMAT3Q9HA38 289 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms